Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0934 ATGCAATTTTCAAAATTATTTTCCTTCATTTTCACTTTTCAGGTCCTTGTTTTTAGTTTTTGTGAACCCCAACAATGTAACAAAAACGATCCAATAACTACAATTTCTGTTAGTCAAGGAGGAAATGCAAACTTCCAAACAATTCAAAGTGCCATTGATTCCATTCCAGAAGGAAACTCTAATTGGATTCACATCACTGTTGATTCTGGTGTTTACAAAGAGAAAATATTGCTTCCAGGTACGAAACCTTGCATTTTTCTGGAAGGGTCTGGAAAGGAAGAAACAAGTGTTCAATGGGGTGATAGTGGCACTGCACATCATACTTCTACTTTCGACTTACAAGCAAATTATACTCTTGTTAAAGGCATTACTTTCCAGAATAACCACAACATAGTAGATGAAAAGAAAAATGTAACTCCAGCAGTTGCAACTCGAGTCCATGCTGATAAATGTGCTTTAATTGATTGTGGTTTTGTTGGAGTACAAGATACCCTTTTTGATTCTTTTGGACGCCATTATTATTACAATTGCTACATTTATGGTCACACTGATTTCATTTTTGGAAAGGGTCAATCAATCTTTCAGGATTGTAAAATATTTTTTTCAAATGGGTTAGCTGAACCACGTGATGGAGTAATTACAGCAAATGAAAGGAGTTCAATAGAAGATCCAAGTGCATTTGTGTTCAAAAATTGTACAATAGATGGATCACAAGGAATTAAGGCTAATCTTGGAAGAGCATTGGAATTAGGAAATCCAAGAGTTATTATATCAGATTCATACTTAGCTGATATGATTAGACCAGAGGGTTGGAATGAAGTTCAAGAATTTGTAGGCTATGAGCAAAACATCACATTTGTAGAAGTGGGATGCAGAGGAGCAGGATCAAATATGACAGGTCGTGTACCTTGGATTAATAAATTAAGTGATTCAGAGATTAATCAATTATTGAATCTCTCTTTTATTGATAATGAAGGATGGACTTCAAATTTTCCAATACAGATTTTAACTTAA 1014 0.3432 MQFSKLFSFIFTFQVLVFSFCEPQQCNKNDPITTISVSQGGNANFQTIQSAIDSIPEGNSNWIHITVDSGVYKEKILLPGTKPCIFLEGSGKEETSVQWGDSGTAHHTSTFDLQANYTLVKGITFQNNHNIVDEKKNVTPAVATRVHADKCALIDCGFVGVQDTLFDSFGRHYYYNCYIYGHTDFIFGKGQSIFQDCKIFFSNGLAEPRDGVITANERSSIEDPSAFVFKNCTIDGSQGIKANLGRALELGNPRVIISDSYLADMIRPEGWNEVQEFVGYEQNITFVEVGCRGAGSNMTGRVPWINKLSDSEINQLLNLSFIDNEGWTSNFPIQILT* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0934 337 SUPERFAMILY Pectin lyase-like 34 331 IPR011050 -
Lan16g0934 337 Pfam Pectinesterase 35 323 IPR000070 GO:0030599|GO:0042545
Lan16g0934 337 Gene3D - 30 335 IPR012334 -
Lan16g0934 337 PANTHER PECTINESTERASE 5 333 - -
Lan16g0934 337 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0934 Lan-Chr16 16367330 16372683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0934 30 327 Carbohydrate Esterase AT1G05310 36.928 3.66e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0934 - - cam:101494460 355.525