Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0929 ATGGCGAATATTAGTCCCAACAGAAATTGTTGTATATGGAACAATCAAAAACTACCTTCTAGCATATCAAAGAAGGCCAAAGATTTGGAGAAAAGGGAAGAATATACTAAACTTTCAAGCTGGACCAACAATTTAAAACTATATAAAAGTGTAATAGTTAAGCACTTGTCTTGCTTCACTCCTTGTGGTTTGACAAACATAACAGGATTGGAAAATAAAAGTGTTAGAGAAAATTCTCCTGTATGTAATGCATGCAACTCCACATCTTCATTGTTTCATTTCAGCAACTCTTGCCTGAAACATGCAACCAATAATTTTGGCAATGAAAATTTAATTGGAAAGGGTGGATTTGCTGAGGTTTACAAAGGTCGTCTACAAAATGGTGAACTAGTAGCTGTGAAGAGAATGATTAGAGGTACAAAAAATGAAAGAACATCAAACTTTCTATCTGAGCTAGGCATTATTGCTCATATTGATCATCCTAATATTGCTAAGCTTATTGGGTGTGGTGGAGAAGGAGAAATGCTCCTTGTCTTTCAACTATCTCCTATGGGAAGTTTGGGATCTCTTCTTCATGGTCCAAATAAAAACGTATTAGATTGGACAAAAAGGTACAAAATTGCACTGGGGATAGCGGAGGGACTCGTGTATCTCCACGAAGAATGTGATAGAAGAATCATTCACAGAGACATCAAATGTGACAACATTCTTCTCACAAAAGATTTTGAGCCACAGATTTGCGATTTTGGCCTTGCAAAATGGTTACCAGAACAAAGTCCACACTTATCTCCCCATGATATATCAAAATTTGAAGGCACATTTGGGTATTTTGCTCCTGAATACATAATGCAAGGCATAGTGAATGAAAAAACTGATGTTTATTCATATGGGGTACTACTTTTGGAGATTGTAACTGGTCGAAGGGCTCTGGATCATTTGCAGCAAAGTATCGTCCTATGGGCAAGGCCATTGATTGATGCTAATAATATAAGGGACCTTGTTGATCCTTCCCTTGGTGATGATTATGACCTAGAAGAGATGAAGTGTGTTGTTTTGACTGCATCTTTGTGTGTTGAGCAATCTCCTTTCTTACGCCCTCGAATGAGTGAGGTTGCTGTATTGCTAAGAGGTGTGCTGAACTTTTGA 1146 0.377 MANISPNRNCCIWNNQKLPSSISKKAKDLEKREEYTKLSSWTNNLKLYKSVIVKHLSCFTPCGLTNITGLENKSVRENSPVCNACNSTSSLFHFSNSCLKHATNNFGNENLIGKGGFAEVYKGRLQNGELVAVKRMIRGTKNERTSNFLSELGIIAHIDHPNIAKLIGCGGEGEMLLVFQLSPMGSLGSLLHGPNKNVLDWTKRYKIALGIAEGLVYLHEECDRRIIHRDIKCDNILLTKDFEPQICDFGLAKWLPEQSPHLSPHDISKFEGTFGYFAPEYIMQGIVNEKTDVYSYGVLLLEIVTGRRALDHLQQSIVLWARPLIDANNIRDLVDPSLGDDYDLEEMKCVVLTASLCVEQSPFLRPRMSEVAVLLRGVLNF* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0929 381 SUPERFAMILY Protein kinase-like (PK-like) 84 374 IPR011009 -
Lan16g0929 381 SMART serkin_6 106 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0929 381 Pfam Protein kinase domain 109 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0929 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Lan16g0929 381 Gene3D Transferase(Phosphotransferase) domain 1 183 380 - -
Lan16g0929 381 ProSitePatterns Protein kinases ATP-binding region signature. 112 134 IPR017441 GO:0005524
Lan16g0929 381 Gene3D Phosphorylase Kinase; domain 1 78 181 - -
Lan16g0929 381 PANTHER OS08G0249100 PROTEIN 39 377 - -
Lan16g0929 381 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 39 377 - -
Lan16g0929 381 ProSiteProfiles Protein kinase domain profile. 106 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0929 Lan-Chr16 16315396 16322418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0929 94 377 Receptor kinase-like Gene Family AT1G53420 45.051 4.52e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan16g0929 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0929 - - lang:109330341 781.556