Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0926 ATGTTTAACCATATGAGAAGAACACCACCACTCTTCTTGGTTCTTGTTACCATCCTCTCCATTGTTTTTCTTGTAACCCATTTCACTATCATCCCAAAAACAACAACAACAACAACAAATCTAAGACACCAAGAAATACACCTTCATTACCAAAAACACATTCAAGTAGCTTATTCCACATGTGAAGGAACACTCTACCCTGACCTATGTGTCTCAACCTTAACCTCATTCCAAGATCTTACCTCAAAATCTGTCCCTCAAACAATATGCACCCTCCTCAACCACACCATATACGAGGTAACATTGTCTTCCTCAAACTGCACCAGTTTTCGAAAGAATCTCCGAAATCTCAACAATCTAGAACAAAGAGCACTTGATGATTGTAACAACCTTTTTGATAACACCATAGAGGAACTCAAAACCTCTATTTATGATCTCAATCAAAGCACAATATGCTCCAAACGTTACCATGACTCTCAAACTTTGCTAAGTGGTGCAATGACCAATTTATACACGTGCCTTGATGGTTTTGCTTATAGTAAAGGAACTCACGTAAGAGATAGGATTGAAGAGAAATTGTATGAGATTTCACATCACATTAGTAACTCTTTGGCTATGCTTAAAAAAGTGCCTGGAGTAAAGAAACAATCTAAGTCTGAAGTGTTCCCTGAATATGGAAAGATGAAAGATGGGTTCCCTTCTTGGGTATCATTCAAAGATAGAAAGCTACTCCAAGCTTCAGTGAATGAGACCAAGTTCGATCTTGTGGTGGCAAAAGATGGCACTGGCAATTTCTCAACTATAGTGGAAGCAATTGCTGCAGCTCCAAACTCGAGCAAAACTAGGTTTGTGATACACATAAAATCAGGGGCTTATTTTGAGAATGTGGAGGTGATAAAGAAAAAGACCAATTTAATGTTGGTTGGAGATGGAATTGGAAACACTGTTGTGAAGGCCAGTAGGAATGTTGTGGATGGGTGGACTACTTTCCAATCAGCTACTTTTGCTGTGGTTGGAGATGGATTCATAGCGAAGGGTATAACATTTGAGAACTCAGCTGGGCCAAGTAAGCACCAAGCTGTAGCCTTGAGAAGTGGTGCAGACTTATCAGCCTTTTACCAATGTAGTTTTGTTGCATATCAAGACACTCTTTATGTTCATTCCTTGCGCCAATTCTACCGTGAATGTGACATTTATGGCACCGTAGACTTCATTTTTGGCAATGCAGCTGTAGTCTTTCAAAATTGCAACTTATATGCACGCAAGCCTGACCCAAATCAAAAGAATTTGTTCACTGCTCAAGGTAGAGAAGATCCTAATCAAAACACCGGAATATCGATTTTGAATTGTAAGGTTGCAGCCGCCGCGGATTTGAACCCGGTTAAATCGACGTTCAAGTCGTACCTAGGCCGCCCTTGGAAAATGTACTCAAGAACTGTTTTTCTTCAATCTTACATAGATGATTTGATTGATCCAGCAGGGTGGTTAGAATGGAATGGAACATTTGCATTGGATACATTATATTATGGAGAGTACAAAAATAGAGGACCTGGTTCTAATACAAGTGCTAGAGTTACTTGGCCAGGTTATCATATAATCAATAGTTCCATTGAGGCAAGCAAATTCACAGTGGGTCAATTCATACAAGGCAGTGAATGGTTGAATTCCACCGATATTCCATTTTTCTCTGATTTGAGTTGA 1701 0.3951 MFNHMRRTPPLFLVLVTILSIVFLVTHFTIIPKTTTTTTNLRHQEIHLHYQKHIQVAYSTCEGTLYPDLCVSTLTSFQDLTSKSVPQTICTLLNHTIYEVTLSSSNCTSFRKNLRNLNNLEQRALDDCNNLFDNTIEELKTSIYDLNQSTICSKRYHDSQTLLSGAMTNLYTCLDGFAYSKGTHVRDRIEEKLYEISHHISNSLAMLKKVPGVKKQSKSEVFPEYGKMKDGFPSWVSFKDRKLLQASVNETKFDLVVAKDGTGNFSTIVEAIAAAPNSSKTRFVIHIKSGAYFENVEVIKKKTNLMLVGDGIGNTVVKASRNVVDGWTTFQSATFAVVGDGFIAKGITFENSAGPSKHQAVALRSGADLSAFYQCSFVAYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPDPNQKNLFTAQGREDPNQNTGISILNCKVAAAADLNPVKSTFKSYLGRPWKMYSRTVFLQSYIDDLIDPAGWLEWNGTFALDTLYYGEYKNRGPGSNTSARVTWPGYHIINSSIEASKFTVGQFIQGSEWLNSTDIPFFSDLS* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0926 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 210 IPR035513 -
Lan16g0926 566 Gene3D - 248 565 IPR012334 -
Lan16g0926 566 Pfam Plant invertase/pectin methylesterase inhibitor 59 206 IPR006501 GO:0004857
Lan16g0926 566 SUPERFAMILY Pectin lyase-like 252 563 IPR011050 -
Lan16g0926 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 22 209 IPR006501 GO:0004857
Lan16g0926 566 SMART PMEI_2 52 206 IPR006501 GO:0004857
Lan16g0926 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 210 IPR035513 -
Lan16g0926 566 PANTHER PECTINESTERASE 12 563 - -
Lan16g0926 566 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Lan16g0926 566 CDD PMEI-like_3 59 212 - -
Lan16g0926 566 PANTHER PECTINESTERASE 12 563 - -
Lan16g0926 566 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0926 Lan-Chr16 16269974 16275744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0926 81 565 Carbohydrate Esterase AT4G02320 56.426 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0926 K01051 - gmx:100813592 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0513 20 3789346 3794149 Lan16g0926 16 16269974 16275744 PCT
Lan4g1389 4 22970751 22975825 Lan16g0926 16 16269974 16275744 PCT