Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0920 ATGATCATAATAGCACGTTTCATGTTACTTGCATTGCTTTTTTCATTCCTAGCAAATACTAGCCAAATGGTATTTGCAAAAGGGAGTGATGAAGTTCAAGAAGCTTGCAAGGTAACAAGGTATCAAAACCTTTGCATACACTCTCTATCACAATTCTCTAACACTTCAGGAAGAAGCCCAAGTAAATGGGCACGTGCAAGTGTTTCAGTAACAATAGAAGAGGTCAAGAATGTTCAAACATATCTTCAAAAATTGAACAGAAACATGAGTATGAGAGGAAGAAATAGAATTGCACTTTCAGATTGTATTGAATCTTTTGCAGATGCTATTGATGAGCTTCACAAATCACTTGGTGTGCTTAGAAACCTAAGTAAAAGCATATTTAGTACCCAAATGGGGAACTTAAATACATGGATCAGTGCAGCACTCACTAGTGAAGACACTTGCATTGATGGATTTGAAGGCCAAAGTGAGATCCAAATCAAATTGCTGCGAAATCGGGTTCGGAATGTTTCTTGCATAACAAGTAATGCTCTTGCTCTTGTTAACAAACTTGCCACTACTGGTATTGGAAGCATCACAGATCCATAG 591 0.3756 MIIIARFMLLALLFSFLANTSQMVFAKGSDEVQEACKVTRYQNLCIHSLSQFSNTSGRSPSKWARASVSVTIEEVKNVQTYLQKLNRNMSMRGRNRIALSDCIESFADAIDELHKSLGVLRNLSKSIFSTQMGNLNTWISAALTSEDTCIDGFEGQSEIQIKLLRNRVRNVSCITSNALALVNKLATTGIGSITDP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0920 196 Pfam Plant invertase/pectin methylesterase inhibitor 31 181 IPR006501 GO:0004857
Lan16g0920 196 SMART PMEI_2 27 181 IPR006501 GO:0004857
Lan16g0920 196 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 185 IPR006501 GO:0004857
Lan16g0920 196 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 25 180 - -
Lan16g0920 196 CDD PMEI-like_3 35 187 - -
Lan16g0920 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 185 IPR035513 -
Lan16g0920 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 187 IPR035513 -
Lan16g0920 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0920 Lan-Chr16 16170453 16171367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0920 32 190 Carbohydrate Esterase AT3G14310 30.488 2.63e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0920 - - gmx:100791264 255.373