Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0912 ATGGTTGAAACAAGACACAGTTCATCTTCATCTTCTTCTACTTCTTCTACTACTTCTTCTCCTACCAAGCGCTCTCACTCTCCACCTTCTCATCCCAAACCCAAACGATCAAAGTTATGTGAGGATGATTCAGAAACAAGCTTGCCCTCCATTGAAATTGGTGATCCAGTCAACAAAACAATACCACATGAACCTGTTTCATTCAAGGATGTTGTTGTTGATGCTATGTCACCACAGTCTCCTTCTGTTACAATTGAACAAGACCCTATTGTTTTGCAGCAAATTCTAGGCGAGACGCTGGATGAAATTGCGATGGATGCCGATAAACGTAAGGCTGTTGCCACAGTTGCGGCAGAGGCGGCTGCTGCAGCTGTTGCTGCTAAGGCGGTTGCTGCAGCTGCTGCAGCTAGGGCAGTTGCTGCTGCAGCTGCAGCTAGGGAAGCACTTGGTCAGTTAAAGGAATGCGAGGCAAAATCCACTATGGCAAACCCCAAGGCTTCTTGGGGAAGGCTAATCTCTCAGTGCTCACAGAATCCTCACCTGCACATGTGCAATCCTCTCTTCACTGTTGGTGGCCGTCGGTGTAATCTATTGCTTAAAGATCCAGATGTTAGTAACGTTTTGTGCAAGTTAAGCTTGGTTGAGCATGTAGGTTCTTTTTTTGCATTACTAGAAATCACGGGAGATAAAGGTGCTGTTCAAGTTAATGGAAAGACTTATCGAAAGAATACCTGTCTGCTTGTTACTGAAGGTGATGAATTAATCTTCAATTCTTCTGGAAAGCATGCTTACATCTTTCAGCAGACTGATATACCTGTGAGTATTTTAGAAGCCCACAAGGCTCCAGTAAAGGGATTGTGTTCCGGTGACCCTTCAGCCGTTGCTGGTGCATCAATATTGGCCTCCTTATCCAATCTTCATAAAGATTTTTCTCTCCTTAAACCTCCTACTTTAACTAGCAAGAATATGCAACACAACACAGAGCTTTCAATGTCATCACTACCTTCTGGCCATAAGGATGATACTCTTGACAATGAAATAAAGGATGCCAGCAATGATAACGAACCGACTGGTGCTGTTTCAGATGAGAAGAGTATTCTTGCATCCTCCATTGCGGTTAATGAAAATCCTAGCCTTGACAATATGGACTTGGATGCTAGTTTGGGTGAAGATGCAGGGAAGAAGAGTGGAGGTACTTGTGAATTAAGGCCTTTGTTGCAGATGCTTGCTGGCTCATGCTCTGAATTTGATTCAGATGGTAGTATTTCTAAGATATTGGAAGAGCGAAGTGAATTAAGAGAGCTCCTTAAGGAAGTAGAATTGGCATCAAGCAATCGTCAAATATTTAAAGAAAATTTACAACAAGGAATTCTTAATCCTGACGATATCGAGGTGTCATTTGAAAGCTTCCCGTATTATCTAAGTGATACAACGAGAAATGCTTTGATTGCTTCTACATATATTCATCTGAAGTGCAATGGTTATGGAAAATATGCTTTAGATCTACCGTCCATATTCCCACGGATATTGTTATCTGGTCCCACAGGTTCGGAAATATATCAGGAAACTTTGTGCAAGGGACTTGCTAAACATTTTGGTGTTAGACTATTGATTGTGGATTCTCTTTCACTTCTTAGTGGAACACCATTAAAGGAAGCTGATTCTGCTAAGGCAAGTTCAAGACATGACAGAACATGTATGTTTACAAAGAGAAACACCCAGGTTACCACAGTACAGATTAAGAAACCAGCTTCTAGTGCCGATGTTGATATTATAAGCGGGTCTGCATTAAATTCTAAAGGTAAGCTGAAGCAAGAGGCTTTTACTGCATCATCAAAAGGTGTTAGTCTTAAAGCAGGTGATCGAGTAAAATTTGTTGGTAACTTTCCTTCGTCTATCTCATCACTACAAAATTATCCTTCTAGGGGACCAAGCTATGGCTCCCGGGGCAAAATTCTCCTTGTTTTCAAAGATAACAAGTCTTCAAAAATTGGAGTTAGGTTTGATAAATCAATTCCTGATGGCAATGATCTTGGGGGCCTTTGTGAAGATGATCATGGTTTCTTTTGTTCCATTAATCATTTACTAAGAGTAGATGGTTTTGGAGGGGATGATTTTGACATGATTGCAATTAACGATATCTTTGAGGTTGCCTCCAATCAGAGTAAAAGTGGGGCACTGCTGGTGTTCATTAAAGATATAGAGAAGGCGATAGTTGGGAACTATGACGTTATTAAGAGTAAACTTGAAAGTTTGCCACAAAATGTTGTTGTAATTGGCTCACACACCCAGCTGGATAATCCGAAGGATAAGACCCAACTTGGCGGCCTTTTGTTTACAAAGTTTGGGAGCAATCAGGCAACACTACTGGATCTTGCTTTTCCGGATAAGTTCAGTAGATTGCGTGGTAGAAGCAAAGAATCGCCCAAAGCTATGAAGCAACTTAGTCGCCTCTTCCCCAATAGATTGACGATAGAGCCGCCTCAGGATGAGGTTTTACTTTCTGATTGGAAGCAACAGTTAGAACGTGACATTGAAATTATGAAAGCTCAGTCCAATGTTGCCAGCATTCGCTCAGTGTTCAAAAGAATTGGATTGAATTGCCCTGACCTTGAGTCTTTTATCATTAAAGATCAAACCCTAACTAACGAAAGTGCGGAAAAAATCATCGGTTGGGCTATAAGTCACCATTTTATGCATTTGTCCAAAGATCCTATCAAAGTGTCCAAGCCTGTGATATCTATAGAAAGCATTAAGTATGGGCTCAACATTCTACAGGGCATCGAAAGTGAAAACAAGAACTTGAGTAAATCAATCAAGGATGTGGTTGCTGAGAATGAATTCGAGAAAAAGTTGCTTGCTGATGTTATTCCTCCAACTGATATTGGGGTTACATTTGATGATATTGGGGCATTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTTATGCTTCCTCTTCAAAGGCCTGAATTGTTTAGCAAAGGGCAATTAACGAAGCCTTGCAAGGGAATATTACTTTTTGGCCCTCCCGGGACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACCGAAGCTGGAGCAAATTTTATTAATATTTCTATGTCTAGCATTGCTTCGAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAATCTTTTCCGTAGCTAGCAAAATTGCCCCAAGTGTTATTTTTGTCGATGAGGTCGATAGTATGTTAGGAAAACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAACGAGTTTATGGTTAACTGGGATGGCCTGCGAACAAAAGAGAAAGATCGTGTACTTGTTCTTGCTGCTACAAACAGGCCCTTTGATCTTGATGAGGCTGTTATCCGGAGGCTTCCACGAAGATTGATGGTTAATTTGCCAGATGCTCCAAACAGAGAAAAAATTCTCAGGGTCATCTTAGCCAAAGAAGATTTGGCACCTGATGTTGATTTGGAAGCAACGGCAAACATGACTGATGGATATACAGGGAGTGACCTAAAGAATTTGTGTGTAACAGCGGCCCAGTACCCAATAAGAGAGATCTTGGAAAAGGAAAAAAAGGAAAAGAGTTTAGCATTGGCTGAGAACAAACCCTTACCTAAATTATGTACCAGTGTTGATATTCGTTCCTTAAAGATGGAGGATTTGATTCATGCACATGAGCAGGTGTGTGCAAGTGTGGCATCGGAGTCGTCGAATATGACCGAGCTACTACAATGGAATGACCTTTATGGAGAAGGTGGATCTAGAAAAAAGAGAGCTTTAAGCTATTTTATGTAA 3810 0.411 MVETRHSSSSSSSTSSTTSSPTKRSHSPPSHPKPKRSKLCEDDSETSLPSIEIGDPVNKTIPHEPVSFKDVVVDAMSPQSPSVTIEQDPIVLQQILGETLDEIAMDADKRKAVATVAAEAAAAAVAAKAVAAAAAARAVAAAAAAREALGQLKECEAKSTMANPKASWGRLISQCSQNPHLHMCNPLFTVGGRRCNLLLKDPDVSNVLCKLSLVEHVGSFFALLEITGDKGAVQVNGKTYRKNTCLLVTEGDELIFNSSGKHAYIFQQTDIPVSILEAHKAPVKGLCSGDPSAVAGASILASLSNLHKDFSLLKPPTLTSKNMQHNTELSMSSLPSGHKDDTLDNEIKDASNDNEPTGAVSDEKSILASSIAVNENPSLDNMDLDASLGEDAGKKSGGTCELRPLLQMLAGSCSEFDSDGSISKILEERSELRELLKEVELASSNRQIFKENLQQGILNPDDIEVSFESFPYYLSDTTRNALIASTYIHLKCNGYGKYALDLPSIFPRILLSGPTGSEIYQETLCKGLAKHFGVRLLIVDSLSLLSGTPLKEADSAKASSRHDRTCMFTKRNTQVTTVQIKKPASSADVDIISGSALNSKGKLKQEAFTASSKGVSLKAGDRVKFVGNFPSSISSLQNYPSRGPSYGSRGKILLVFKDNKSSKIGVRFDKSIPDGNDLGGLCEDDHGFFCSINHLLRVDGFGGDDFDMIAINDIFEVASNQSKSGALLVFIKDIEKAIVGNYDVIKSKLESLPQNVVVIGSHTQLDNPKDKTQLGGLLFTKFGSNQATLLDLAFPDKFSRLRGRSKESPKAMKQLSRLFPNRLTIEPPQDEVLLSDWKQQLERDIEIMKAQSNVASIRSVFKRIGLNCPDLESFIIKDQTLTNESAEKIIGWAISHHFMHLSKDPIKVSKPVISIESIKYGLNILQGIESENKNLSKSIKDVVAENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFSKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIASKWFGEGEKYVKAIFSVASKIAPSVIFVDEVDSMLGKRENPGEHEAMRKMKNEFMVNWDGLRTKEKDRVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVDLEATANMTDGYTGSDLKNLCVTAAQYPIREILEKEKKEKSLALAENKPLPKLCTSVDIRSLKMEDLIHAHEQVCASVASESSNMTELLQWNDLYGEGGSRKKRALSYFM* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0912 1269 MobiDBLite consensus disorder prediction 1 62 - -
Lan16g0912 1269 Pfam AAA+ lid domain 1158 1194 IPR041569 -
Lan16g0912 1269 Gene3D - 1137 1231 - -
Lan16g0912 1269 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 117 1269 - -
Lan16g0912 1269 Coils Coil 422 452 - -
Lan16g0912 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 964 1240 IPR027417 -
Lan16g0912 1269 CDD AAA 1003 1136 - -
Lan16g0912 1269 Pfam ATPase family associated with various cellular activities (AAA) 1005 1134 IPR003959 GO:0005524|GO:0016887
Lan16g0912 1269 Gene3D - 963 1242 IPR027417 -
Lan16g0912 1269 MobiDBLite consensus disorder prediction 1 26 - -
Lan16g0912 1269 SMART AAA_5 1001 1138 IPR003593 -
Lan16g0912 1269 ProSitePatterns AAA-protein family signature. 1108 1127 IPR003960 GO:0005524|GO:0016887
Lan16g0912 1269 Coils Coil 925 945 - -
Lan16g0912 1269 MobiDBLite consensus disorder prediction 327 362 - -
Lan16g0912 1269 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 117 1269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0912 Lan-Chr16 16095804 16107893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0912 964 1232 Calmodulin-binding Proteins AT3G56690 38.686 1.58e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0912 - - lang:109330271 2358.56