Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0905 ATGAGAACCCAAAATCTTCTTCTCATCTTCGCACTCTTCTTCTTAACCGCAACATCCACTCTCCACGGTACCGCCGGTGACTATGACGGCGGCGGCGGCTCCACCGATTTCATCCGCAGAAGTTGCAACACCACACTCTACCCTGACGTATGCTTCACCTCCCTCTCTCGCTACGCCAATGCCGTCCAACAAAACCCAGGCCAACTCGCTCGAGTCGCGATCTCCGTAACGCTCTCCAAGGTTCACCGCGTGGTGTCCTTCGTCTCAAACCTCACGCGCGTGGCCGACTACAGCGGTGACTCACGCGCCGCGTCTGCAATCCACGACTGCTTCACCAATCTCGATGACGCCGTCGATGAAATCCGCGGCTCGCTCAAGCAGATGCGGCGGATTGGAGCCTCTGGCTCCGGCGAAGGGTCGTTCCTGTTTCAGATGAGTAACGTGCAGACGTGGATGAGTTCGGCGTTGACGGACCAAGAAACGTGTACGGATGGGTTTGAAGATGTAGAGGATGGTACGGTGAAGACGCAGGTATGTGATCGTGTCTCGAACGTGAAGAAGTTCACGAGTAATGCTTTGGCACTCGTGAATAGTTACGCCAATAAAGGAGCACCTTGA 618 0.5534 MRTQNLLLIFALFFLTATSTLHGTAGDYDGGGGSTDFIRRSCNTTLYPDVCFTSLSRYANAVQQNPGQLARVAISVTLSKVHRVVSFVSNLTRVADYSGDSRAASAIHDCFTNLDDAVDEIRGSLKQMRRIGASGSGEGSFLFQMSNVQTWMSSALTDQETCTDGFEDVEDGTVKTQVCDRVSNVKKFTSNALALVNSYANKGAP* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0905 205 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 199 IPR006501 GO:0004857
Lan16g0905 205 Pfam Plant invertase/pectin methylesterase inhibitor 36 195 IPR006501 GO:0004857
Lan16g0905 205 CDD PMEI-like_3 41 201 - -
Lan16g0905 205 SMART PMEI_2 33 195 IPR006501 GO:0004857
Lan16g0905 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 199 IPR035513 -
Lan16g0905 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 199 IPR035513 -
Lan16g0905 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 202 - -
Lan16g0905 205 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0905 Lan-Chr16 15976852 15977665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0905 34 195 Carbohydrate Esterase AT5G53370 32.317 2.97e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0905 - - gmx:100812251 298.13