Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0898 ATGAGGAGCAAAAGCCAGAGAACTGTGAAGAAGAATATGAACAAGATGAAGGGAACTCTCACTACTACCAAACACTTCCAGCTTCCACTAAATCAATTCTCCTTTTTACCCCTCCAACAGAACACTTCTTCTTCTACCCCTTCCACGTTCCAGAACCTTCTAGATCTACAATCTCATCACCACGCTTCTTCTTCTTCTTCTCAGTTCACCGTCACAAATGACGCCGCCGCCGTCAATGTTAATATCGCCGCCGTGGACGATAACAATAAAATGGACTTCATTCTCAGTCAGGACTTCTTTTGTACTCCAGATTACATAACCCCTGATAATCAGAACGATTTCAATAAGGAGAATACACCTTGCCCTAAATCACCGGAGAAGATAAACACTTCGAAAAGCAAGAGATGTCGATTGGATGCTATCTCAGCAAACCCATTCAGCCCTATGTTTTCAAGTGACCATCAAGAAGTTGCAGAACTTGGAAAGGACTATGCTGCAGAGGAATTAGCTTTTGAGAAAATAATAGTGGATGATAAACCAAAGGCTCCAAATTATGTCTCACATTCTGCAGTTGCATTGCGCTGCAGGGTTATGCCTCCTCCTTGCATTAGTAACCCATATTTGAAAGAAGTTTCTAAAAAGGAGACAGATCCCTTTGGAAACCAAAGATCAAAATGCGCAGGTCTCTTCCCTCCAACTATTGGTGGTGATGGTCTTTCACGCTACCACACTGAATTTCATGAGATTGAGCAAATTGGTAGAGGGAACTTTAGTAGTGTTTTCAAAGTATTAAAGCGAATAGATGGCTGCTTGTATGCTGTGAAACACAGCTCCAGACAATTACGACTGGAAACAGAAAGGAAGAAAGCTTTAATGGAAGTTCAATCTCTGGCAGCATTAGGGTCTAATGAGAACATCGTGGGATACTATTCTTCATGGTTTGAAAATGAACAGCTCTACATTCAGATGGAGCTATGCGATCACAGCTTATCCATCGAAAAATGCTCTGCATTATTTACAGAAGGACAAGCTCTAGAAGCTTTATATCAGGTAGCCAATGCACTGCGATTCATACATGAGAAGGGAATAGCTCATCTAGATGTTAAACCTGATAACATTTATGTCAAAAATGGTGTGTATAAGCTTGGCGATTTCGGATGTGCAACTCTTCTTGATAATAGCCTGCCAATTGAGGAGGGTGATGCTCGTTACATGCCACAAGAAATCCTTAATGAGAACTATGACCATCTTGACAAGGTTGATATCTTCTCCTTAGGAGCTTCTATTTATGAGCTCATTCGCAGATTGCCTTTACCAGATTCGGGATGTCATTTTTTAAATCTTAAAGAAGGCAAGTTGCGACTTTTGCCTGGTCATTCATTGCAGTTTCAGAACTTGCTCAAGGTCATGATGGACCCAGATCCTGTAAAGCGACCTTCTGCTAGAGAGTTGGTAGAGAATCCAATTTTTGAAAGGGTCCTAAAATCATCAAAAAATTAA 1500 0.4093 MRSKSQRTVKKNMNKMKGTLTTTKHFQLPLNQFSFLPLQQNTSSSTPSTFQNLLDLQSHHHASSSSSQFTVTNDAAAVNVNIAAVDDNNKMDFILSQDFFCTPDYITPDNQNDFNKENTPCPKSPEKINTSKSKRCRLDAISANPFSPMFSSDHQEVAELGKDYAAEELAFEKIIVDDKPKAPNYVSHSAVALRCRVMPPPCISNPYLKEVSKKETDPFGNQRSKCAGLFPPTIGGDGLSRYHTEFHEIEQIGRGNFSSVFKVLKRIDGCLYAVKHSSRQLRLETERKKALMEVQSLAALGSNENIVGYYSSWFENEQLYIQMELCDHSLSIEKCSALFTEGQALEALYQVANALRFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDNSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIYELIRRLPLPDSGCHFLNLKEGKLRLLPGHSLQFQNLLKVMMDPDPVKRPSARELVENPIFERVLKSSKN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0898 499 SMART serkin_6 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0898 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 80 404 - -
Lan16g0898 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 417 493 - -
Lan16g0898 499 Gene3D Phosphorylase Kinase; domain 1 237 324 - -
Lan16g0898 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Lan16g0898 499 PANTHER BNAA08G27310D PROTEIN 417 493 - -
Lan16g0898 499 PANTHER BNAA08G27310D PROTEIN 80 404 - -
Lan16g0898 499 Pfam Protein kinase domain 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0898 499 Gene3D Transferase(Phosphotransferase) domain 1 325 495 - -
Lan16g0898 499 MobiDBLite consensus disorder prediction 1 21 - -
Lan16g0898 499 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Lan16g0898 499 SUPERFAMILY Protein kinase-like (PK-like) 239 492 IPR011009 -
Lan16g0898 499 ProSiteProfiles Protein kinase domain profile. 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0898 Lan-Chr16 15811937 15816292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0898 2 493 Core Cell Cycle Gene Families AT1G02970 57.738 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Lan16g0898 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0898 K06632 - gmx:547742 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0898 16 15811937 15816292 Lan19g0298 19 3284139 3290462 LSH