Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0893 ATGGTTGAGACAACAAGTAGAATGAGAAGAAAGCCTTTAATTCTCTCTTCAACCAAAAATCTCATCAATTCTATATTAACACCTTCTTCAATTTTCCATTTTCATGATGATTCTTCTTCAAAATTGCACTTACCCGTTGGAATTCTCCGATTCAATAACCATTCTTCACTCCTTGCTCTCTCTACTTCTCTTCTCATAAAGCTTTCCATCACTTCTGGTTCACTGGTGCTGGTGAAAAATACTGAGATGAACATACAGAGAGTTGCAGTGGTTGTCGCTCTTGATCCTCCAGGCACCACCCCGGAACCCCCTTGTGATAATATGAAGTCACCTTCGTCTCGCTCTTCAAGAATAATGCTTGTACTTCCTTCTTGTGATTTCCCTCATAGTGACCCCTTGTTATTGGATCATGAAGTTGCTTATTTATCTCCTCTTCTAGCCTTTAATCTTAACTTGCACATTTCGTGCTTAAAATCCATTCTACAAAATGGGCAAGACTCTTTAGCTACTTATTTTAAACCTGAAGGGGGTGATGAGGATACTGCAAAAAGCATTAAGGATTATGCTGTCAATGTAGAATTGGAACCTCTTGCTCAACCTCCAAGATTTGCCTCACATTTGAGGGTTTCTTTTGTGAAGATACCGGAAAGTGGTGTCCTTGAATCTATTAGAGGAACTTCACCCGTTGAATTGGAAGAACGGCAAGACATGATTGACATGGCATTACAAAAGTACTTTGAAGTCAATAGATATTTGTCAAGAGGAGATGTTTTCGGAATTAACATAAATTGGAATTGCAATTCTACTATCTGCATCCCTTGCAACCAAAACTCACAAAAGAAAAATAACAACCTTCTCTACTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAATTCTTTGTGTCAATAGAACTTCGACTGCGCTGGTGCTCGGAGGGAGTTCCCCATCTGCCCTTCCTCCAGATTTGTTAATTGCTGGACAAGAAGGGCCTGTGCCTTTGCAAGGGGACACCGTAAAGATATTGGCTTCCATACTTACACCAACTTACTGTCCATCAGCACTTTCTTCAAAGTTCAGAGTTTCGGTTCTATTATATGGCTTAGCAGGTTGTGGGAAGAGGACTGTTGTTAGATATGTTGCTCATCGACTGGGCTTGCATGTGGTGGAATATAATTGTCATGATCTAATGGCGTCTGATAAGACATCTGTTGCTCTTACTGAAGCTTTCAAGACAGCTCGAAGGTACTCACCAACAATACTTCTTCTACGTCATTTTGATGTTTTCCGAGATTCAAATTCACAAGAGGGTTCACTTAATGATCAAAGAGGCAATACATCTGAAGTTGCATCAGTTATCAGGAAATTCACCGAGCCAGTTAGTGAACATGGCGATAGTAACTCCCAAGGGAAATCAAACAGTGAATCTGTAAGCTCTAACTTCGTTGAGAGGAATCCTGAAAAGACTAGCGGGCATAAGATCCTATTGATTGCAGCTGCTGACAGTTCTGAAGGTCTACCGTCGACTATCAGGCGCTGCTTTAGCCATGAAATAAGCATGGGGACTTTGACTGAAGAACAAAGAGCTGAAATGCTATTTCAGTCACTGCAAAGTGTTTCAGAACTCCTCTCTGACACTGATGGGTTTGTAAAAGAAATGGTTGGACAAACATCTGGTTACATGCCCAGGGATATGTCTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGAAGCAATGCTGAAGTAGATAAAGGTAGGCTCGAAGATGTAGATGATTCTCTTGGTTCTGAAGTGACGGAGAACAAGAACCAGAATGTTTCATCTCAGATTCCTGGTAAAGAAGACTTGATGAAAGCTTTAGAACAATCAAAGAAACGAAATGCCACAGCATTGGGCGCTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGACTCGAAGATGTTAAAAAATCAATCCTAGATACTGTTCAGTTGCCTCTTCTGCATAAAGATCTCTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTTTGTATGGTCCCCCTGGAACTGGCAAAACGTTATTGGCAAAAGCTGTTGCTACAGAATGCTCCTTAAATTTTCTCAGTGTAAAAGGTCCTGAACTAATCAACATGTACATAGGAGAGTCTGAGAAGAATGTTCGTGACATTTTCCAGAAGGCGAGATCAGCGCGTCCATGTGTTATCTTCTTTGATGAACTTGATTCTCTTGCACCAGCTCGAGGTGCTTCAGGTGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGATGGCTTAAGCGATTCTTCACAGGATCTATTTATTATTGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCACTTCTACGTCCTGGTCGATTTGATAAACTGCTATATGTTGGAGTAAACTCCGATCCATCTTACAGAGAACGGGTCCTGAAAGCACTTACCCGGAAGTTTAAATTGCATGATGATGTTTCGCTGTACTCGATAGCTAAAAAATGTCCACCAAACTTCACCGGTGCAGACATGTATGCCTTATGCGCAGACGCTTGGTTCCATGCTGCAAAGCGCAAGGTTTTAAGTGAAGATCCAGAGTCTTCCAACCAAGACAATGAAGCAGATTCTGTTGTTGTTGAATACAATGATTTTGTGCAGGTATTAGGAGAGCTATCACCTTCTCTCTCCATGACTGAGCTTAAGAAGTATGAACAACTTAGAGATCAGTTTGAAGGCACCTCTAAATAA 2784 0.4134 MVETTSRMRRKPLILSSTKNLINSILTPSSIFHFHDDSSSKLHLPVGILRFNNHSSLLALSTSLLIKLSITSGSLVLVKNTEMNIQRVAVVVALDPPGTTPEPPCDNMKSPSSRSSRIMLVLPSCDFPHSDPLLLDHEVAYLSPLLAFNLNLHISCLKSILQNGQDSLATYFKPEGGDEDTAKSIKDYAVNVELEPLAQPPRFASHLRVSFVKIPESGVLESIRGTSPVELEERQDMIDMALQKYFEVNRYLSRGDVFGININWNCNSTICIPCNQNSQKKNNNLLYFKVIAMEPSDEPILCVNRTSTALVLGGSSPSALPPDLLIAGQEGPVPLQGDTVKILASILTPTYCPSALSSKFRVSVLLYGLAGCGKRTVVRYVAHRLGLHVVEYNCHDLMASDKTSVALTEAFKTARRYSPTILLLRHFDVFRDSNSQEGSLNDQRGNTSEVASVIRKFTEPVSEHGDSNSQGKSNSESVSSNFVERNPEKTSGHKILLIAAADSSEGLPSTIRRCFSHEISMGTLTEEQRAEMLFQSLQSVSELLSDTDGFVKEMVGQTSGYMPRDMSALIADAGANLFPRSNAEVDKGRLEDVDDSLGSEVTENKNQNVSSQIPGKEDLMKALEQSKKRNATALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDPSYRERVLKALTRKFKLHDDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSEDPESSNQDNEADSVVVEYNDFVQVLGELSPSLSMTELKKYEQLRDQFEGTSK* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0893 927 ProSitePatterns AAA-protein family signature. 784 802 IPR003960 GO:0005524|GO:0016887
Lan16g0893 927 Gene3D - 639 916 IPR027417 -
Lan16g0893 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 921 IPR027417 -
Lan16g0893 927 SMART AAA_5 360 525 IPR003593 -
Lan16g0893 927 SMART AAA_5 677 817 IPR003593 -
Lan16g0893 927 Gene3D - 336 545 IPR027417 -
Lan16g0893 927 PANTHER PEROXISOME ASSEMBLY FACTOR 2 46 923 - -
Lan16g0893 927 Pfam ATPase family associated with various cellular activities (AAA) 364 521 IPR003959 GO:0005524|GO:0016887
Lan16g0893 927 Pfam ATPase family associated with various cellular activities (AAA) 681 813 IPR003959 GO:0005524|GO:0016887
Lan16g0893 927 Gene3D - 815 901 - -
Lan16g0893 927 MobiDBLite consensus disorder prediction 463 486 - -
Lan16g0893 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 580 IPR027417 -
Lan16g0893 927 MobiDBLite consensus disorder prediction 459 487 - -
Lan16g0893 927 CDD AAA 354 424 - -
Lan16g0893 927 PANTHER AAA-FAMILY ATPASE 46 923 - -
Lan16g0893 927 CDD AAA 675 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0893 Lan-Chr16 15732391 15740824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0893 638 923 Calmodulin-binding Proteins AT3G56690 42.857 2.53e-62 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0893 K13339 - gmx:100820183 1385.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g1031 20 11178582 11179345 Lan16g0893 16 15732391 15740824 PCT