Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0870 ATGGCAACAAAAGGTTTTGAACCTTGTCCCTCTGAATCTTCTGCAAGCATGTCTGTCACCTCCAATCATGAAATAGATCATAATGCCTATTGCAATTCAGATTCCCATACGGGGTTGGATTTTGTGAAGCTTTTAAAGGATGGTGATTTGGTTGGTGGGTCCATAGTAGAGCTCGATTTATTCAATAATAACAATGAAGCAAAATATCAGAACATCGAGGAAAAAACATTGGAGTCAAGGACTTTCTTATGCAACTTTTGTAAAAGAAAGTTCTCGACTTCTCAAGCTTTGGGAGGACACCAAAACGCACACAAGCAAGAGCGTGCAATTGCAAAACGTCGCCAAAATGTTGATACTAATACTTTGGGCCTCCCTCATTTTCCTTATTACCCTTTTACTAGCCTTTCCACACAACCACCATACCCTTTGTATAGGTCCAATAATAACAGGGCAATAGGACTTGGGGTGCCTTCTTATCCTTGGACCACACCTGGCTTAAGGTATGGTCCTAATGGTGATGGGTGGGCAAGCCCAATGCAAGGGATGCCAAATCAATCATTACCCCTTGATAGGTTGAATAGTATAGAGGGTTTGCAAGCTCATGATCATAGTATTGTTGGTCCTAAACCCCATTTTGGAGATTCTCTTACTAATGTTGCTACTACAAGTTCAAGCTCAGCCATTAAAATGATAACTATGACAAACAAGGATGATCATCATTCCAACAAAGAAGAATTAACCTCCATTCCTAAATGTTCTGTTCTTGATTTGTCACTCAAGCTTTAA 786 0.4008 MATKGFEPCPSESSASMSVTSNHEIDHNAYCNSDSHTGLDFVKLLKDGDLVGGSIVELDLFNNNNEAKYQNIEEKTLESRTFLCNFCKRKFSTSQALGGHQNAHKQERAIAKRRQNVDTNTLGLPHFPYYPFTSLSTQPPYPLYRSNNNRAIGLGVPSYPWTTPGLRYGPNGDGWASPMQGMPNQSLPLDRLNSIEGLQAHDHSIVGPKPHFGDSLTNVATTSSSSAIKMITMTNKDDHHSNKEELTSIPKCSVLDLSLKL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0870 261 SUPERFAMILY beta-beta-alpha zinc fingers 79 109 IPR036236 -
Lan16g0870 261 Gene3D Classic Zinc Finger 63 123 - -
Lan16g0870 261 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Lan16g0870 261 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 25 261 - -
Lan16g0870 261 PANTHER ZINC FINGER PROTEIN JAGGED 25 261 IPR045320 GO:0003700
Lan16g0870 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0870 Lan-Chr16 15517571 15518356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0870 78 211 C2H2 Transcription Factor Family AT5G01860 36.879 5.73e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0870 - - lang:109329362 543.117