Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0837 ATGTATCAATATTCTTCCCTTATGGGAATTCAACAACTGAGTTTTGAGCCAATCAAATCACCCATCAACATTGTGGATAATCCTCTTCAAACACCACCAAGTTTTTGTTCAAGTATTGATGTTCCTAATTGGTGTTTTGAGTTTCCAAAGACAACAAACACATACTCATCCATGATGTTTTCACAACAAGCTTGTGGAGATAACTTCACCAATTTCACTATAAAAGATACACCATCATCTGAATTCACAAGAAGCTCCTTGCACTCTGTTGCTGAATCTTTCATGTCTTGCAGTGCAGATAGTGAATGTTCTTCTGAAAAAAATGGTAACTTTGCTTCTGATGCTGAAAAATATAGTAACTTTCAGCCTGATAATATAGCATTTTATGAGCACTTTTCACAAGAACGTGATAAATTAGTGAGGGGTGATGCTGCCAAAGATGAGAGGGGCCTTGAAATCTCCTTCCAAAGAAATCAGTTGTCTTCATGTACAAAGCCAGAAAAGCAATCACCTCAACCTCGTGGACTTACCTGTGTCACTTCTAGCAACAACTCTGCTTCTAAAAGAACTCCAAATGGTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAACCATTTATGATGATTGTTAATCGCCTTGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTAGAAGAGATGATAAAATCAGATAATTTGCTTTCCATTTCTCATGTTAAAAGTCATTTGCAGAAATGTAGGACTACAATAAACATGCACAAAGCTATGCAGGAAAGATCTGGGGAAGGACAAATAACAGATGGGGTCACTGATCTTCAAGTAAAAATCCATATGCAAATTGAAGAGTCAAGGAAACTGCAGCTTGAAGTCAGGAGAAGTATTCACCAACAACTAGAGATGCAACGACATTTGCAAGTGCTAATTCAACAGCAGAGGAAGCAGCTCAAAATAATGTTAGATAATCAAAAGGAAGGAACCAAATTGGAGAAAATCCTTGGCACGGAACTGGATGGGAATGACTCACAATGA 1035 0.3787 MYQYSSLMGIQQLSFEPIKSPINIVDNPLQTPPSFCSSIDVPNWCFEFPKTTNTYSSMMFSQQACGDNFTNFTIKDTPSSEFTRSSLHSVAESFMSCSADSECSSEKNGNFASDAEKYSNFQPDNIAFYEHFSQERDKLVRGDAAKDERGLEISFQRNQLSSCTKPEKQSPQPRGLTCVTSSNNSASKRTPNGKRRIRWTKDLHEPFMMIVNRLGGPEKAKPKAILEEMIKSDNLLSISHVKSHLQKCRTTINMHKAMQERSGEGQITDGVTDLQVKIHMQIEESRKLQLEVRRSIHQQLEMQRHLQVLIQQQRKQLKIMLDNQKEGTKLEKILGTELDGNDSQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0837 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 38 338 IPR044848 GO:0003700
Lan16g0837 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 38 IPR044848 GO:0003700
Lan16g0837 344 MobiDBLite consensus disorder prediction 158 190 - -
Lan16g0837 344 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 194 250 IPR006447 GO:0003677
Lan16g0837 344 Pfam MYB-CC type transfactor, LHEQLE motif 280 326 IPR025756 -
Lan16g0837 344 MobiDBLite consensus disorder prediction 158 194 - -
Lan16g0837 344 Gene3D - 193 252 - -
Lan16g0837 344 SUPERFAMILY Homeodomain-like 193 252 IPR009057 -
Lan16g0837 344 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 6 38 - -
Lan16g0837 344 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 38 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0837 Lan-Chr16 14897874 14901956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0837 182 327 G2-like Transcription Factor Family AT4G28610 41.892 6.78e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan16g0837 Myb_CC_LHEQLE 7.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0837 - - lang:109344853 423.705