Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0835 ATGGTTTGCGACTACTACCTCTATGTGCATTTCAGCTTCGCTGTCTTCTCGTCAATTTTGATTTCCCAGGGTTTCGCATTTACTCATCCACCTGAAGTTTTAGCTCTCAAGGATCTATATAGGACCTTAAACTACCCATTGGTGCTCCAAGGATGGAATGGTAGTGATCCTTGTGAAGAGTCTTGGACAGGAATAACTTGTTCTGGATCATCGGTTATTCACCTCAAAATTCAAGGATTAAACCTCACTGGGTATCTTGGAAGCAAGCTTTATAGTCTAAATAACTTGACAGAACTTGATGTCAGTTCTAATAAGATTGTTGGAGAAATGCCATTCGGTTTACCCCCAAATGCCACACATATGAACCTAAGCCACAATTTCTTAAGTGGACCCATTGGCGATGTATTTAATGGCCTAGATAATCTCAAAGAATTGGACCTTTCGTACAATAATTTCTCGGGAGATCTACCACGATCATTTGGTTCCTTATCAAACCTTTCTAGATTGTTCCTGCAGAATAACAGATTCACTGGCTCAGTTGCCTACTTGGGTGAACTTCCTCTTACAGATTTGTACATTCAAGACAATGTGTTCAGTGGCATTCTTCCACATCATTTTCAGTTCATACCCAATTTACGGATTGGAGGGAATAAATTCCATGAAGTAGACAACTCTCCTTCCTGGACTTTTCCTTTGGAAATTGTACCAGTTGAGCATCATAATATTAGTCATCCACCCACAACTCAGGCAAGTGCCATCAAGAACTATCCTCCTCCCAAAGTAAGTGAGCACAAGAAGAAATGTATAGGTCCTGGAAGAATAGCTTTTATGGTTGGTGGAGGAACACTAATAGCAACAGGTGTGGCACTATTAGTGGCAATCCATTTGAATAAATTGCGTGCACAGAATCTGAACATGAAGAGGTTGGAAAGCAGCCACAGTTCTTTGAATTCTCGTCCAACCAGTGCAACCATAGAGGTCTCTCCTACTGCATTAGATGAGAGCCCACCAGTTCCACCTGTTAATTCTTCAACTGTATCCCTTCTTGGTCCAATGCAATTGGCTTCCATGCACTTCAACAATGCACAGGAACCGTTACGAAGGAGTTTTTCCAAAAGAGGCAGATCCACTGGAAGGATGAAAGTTTATACGGTAGTGGAGCTTCAGTTGGCCACTAACAGATTCGATGAAGGCAACCTTCTGGGAGAAGGATCACTTGGCCCTGTGTACAGAGCTGAATTTCCGGATGGCAAAATTTTGGCAGTGAAGAAAATAAATATGGAGTGCCTATCATTCAGAGAAGAGGAAAAGTTCTTGGATGTCATTTGCACAGCTTCCCGATTGAAGCACCCCAACATTGTAGCACTCAATGGGTACTGTTTGGAGCGGGGAAAGCATCTTCTTGTACATGATTATATTAGAAATTTAACTCTAAAAGATGCTCTTCATAGTGGAGCATACAAACCTCTATCGTGGGTCCTTCGTCTCCGGATTGCTCTAGGTGTTGCTCAGGCTCTCGACTATTTGCATTCAACATTGTCCCCTCCTGTAGCCCATGGCAACTTCAAGGCTGCCAACATTCTACTGGATGAAAATTTGATGCCTCATGTTTGTGACTGTGGCTTGGCTATTTTGAACCCACCGAGGAGCAAGCTACTTACAATTCCTGCTACTGAGAATACTATTGGAGACAAAGGCTACATTGAACCCGAGCATGGCCGACCAGGAACTGGAAGCAGAAAGAGAGACGTGTTTGCCTTTGGGGTATTGCTTCTAGAATTGTTAACAGGAAGGACACCTTTCGATGGTTCCAGGCCAAGGGAGGAGCAATATCTAGCAAAATGGGCTTCATCCAGGCTTCATGACAGCGCAAGTTTGGAACAGATGGTGGATCCCAGTATTAAAAGTGCATTTTCATCCAAGCCTCTTTCTCCTTATGCTAATATCATCGCCCGCTGCATACAGCCTTTAAGGCAATTACGTCCTCCAATGTCCGAAGTGGTGGACTTTCTTGCATCATTTTCACAGAAGTTCAACATTGCTAACAGAGGTGAAGCAGATTGTACTGTAGTTGATCCATTTGAGAGGTCTTTCCGTTCAACCAACACACGCTTTATTGGTTCACCCGTAAAGAGCCATGTATCTAATTGA 2151 0.4305 MVCDYYLYVHFSFAVFSSILISQGFAFTHPPEVLALKDLYRTLNYPLVLQGWNGSDPCEESWTGITCSGSSVIHLKIQGLNLTGYLGSKLYSLNNLTELDVSSNKIVGEMPFGLPPNATHMNLSHNFLSGPIGDVFNGLDNLKELDLSYNNFSGDLPRSFGSLSNLSRLFLQNNRFTGSVAYLGELPLTDLYIQDNVFSGILPHHFQFIPNLRIGGNKFHEVDNSPSWTFPLEIVPVEHHNISHPPTTQASAIKNYPPPKVSEHKKKCIGPGRIAFMVGGGTLIATGVALLVAIHLNKLRAQNLNMKRLESSHSSLNSRPTSATIEVSPTALDESPPVPPVNSSTVSLLGPMQLASMHFNNAQEPLRRSFSKRGRSTGRMKVYTVVELQLATNRFDEGNLLGEGSLGPVYRAEFPDGKILAVKKINMECLSFREEEKFLDVICTASRLKHPNIVALNGYCLERGKHLLVHDYIRNLTLKDALHSGAYKPLSWVLRLRIALGVAQALDYLHSTLSPPVAHGNFKAANILLDENLMPHVCDCGLAILNPPRSKLLTIPATENTIGDKGYIEPEHGRPGTGSRKRDVFAFGVLLLELLTGRTPFDGSRPREEQYLAKWASSRLHDSASLEQMVDPSIKSAFSSKPLSPYANIIARCIQPLRQLRPPMSEVVDFLASFSQKFNIANRGEADCTVVDPFERSFRSTNTRFIGSPVKSHVSN* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0835 716 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lan16g0835 716 SMART LRR_typ_2 139 162 IPR003591 -
Lan16g0835 716 SMART LRR_typ_2 163 186 IPR003591 -
Lan16g0835 716 SMART LRR_typ_2 93 121 IPR003591 -
Lan16g0835 716 SUPERFAMILY Protein kinase-like (PK-like) 376 671 IPR011009 -
Lan16g0835 716 Gene3D Ribonuclease Inhibitor 28 269 IPR032675 -
Lan16g0835 716 ProSiteProfiles Protein kinase domain profile. 395 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0835 716 PANTHER OS01G0253100 PROTEIN 6 710 IPR045271 GO:0004714|GO:0006468
Lan16g0835 716 Gene3D Transferase(Phosphotransferase) domain 1 473 691 - -
Lan16g0835 716 SUPERFAMILY L domain-like 32 245 - -
Lan16g0835 716 Gene3D Phosphorylase Kinase; domain 1 358 472 - -
Lan16g0835 716 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Lan16g0835 716 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 6 710 - -
Lan16g0835 716 Pfam Protein kinase domain 397 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0835 Lan-Chr16 14867383 14875271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0835 15 716 Strubbelig Receptor Gene Family AT5G06820 49.452 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan16g0835 Pkinase 4.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0835 - - gmx:100775254 981.474