Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0825 ATGAATCTCCAAAGCAACTTCCTATCTCTTTTGGTTCCCCTTACAGCAGTTTTTGCATCATTATATCTTATAAATCCAAATCCACAGTGTCTCAATATTTTCAAAGACTTCAGTGTCACAACATTGTCATCATCGTCTTTCTATTTGACACTGCCTTTAAATTACAACTTTGGAAGAAACCATCATCATAGACCACACAAGAAACATGATGGTAGTGGAGATGCTGGTACTATATGTGATGATTTCCCTCAAGGGATTCCACCCCCAAGTACCAATACCACTTCCTATCTTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACAGTACAAGCAGCAGTGAATGCAGTTCCAGATTTTAGTGACAAAAGAACTATAATATGGATCAATAGTGGCATGTACTATGAGAAAGTTATGGTGCCTAAAACCAAACCAAATATTACATTTCAAGGACAAGGATATACTTCAACAGCAATTGCATGGAATGATACTGCAAAGTCCGCAAATGGCACATTTTATAGTGGCTCTGTACAAGTGTTTGCCTCCAACTTTATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATGCCAAGTCCTGGGGTTGAAGGAGCACAAGCAGTAGCTATTAGAATATCAGGAGATCAAGCTGAATTCAGGGGTTGTGGATTCTTTGGAGCCCAAGACACACTTCATGATGATAAGGGGCGCCATTACTTCAAAGATTGCTATATCCAAGGCTCCATTGATTTCATTTTTGGTGATGCAAGGTCACTCTATGAGAATTGTCAACTAGTTTCAATAGCCAATCCAGTATCCCCGGGGCAAAGGAGCATAAATGGTGCTATTACAGCTCATGGTAGAGTTTCAATGGATGAAAATACAGGTTTTGTATTTGTAAATTGTTCAATAGGAGGCAATGGAAGAATATGGTTAGGTCGTGCATGGAGGCCATTTTCTCGTGTTGTTTTTGCCTTCACAGCAATGTCAGATATTATTGCTCCTGAAGGTTGGAATGATTTCAATGACCCTTCAAGGGATCAGACTATATTCTATGGAGAATATAATTGCTCAGGGCTTGGGGCTAGTATGACTTTGAGGGCATCTTATGTACAGAGATTAAATGATACACAAGCTTTTCCATTCCTCAATGCAAGTTATATTGATGGTGACCAGTGGTTGGAAATTTACAAATAA 1197 0.3885 MNLQSNFLSLLVPLTAVFASLYLINPNPQCLNIFKDFSVTTLSSSSFYLTLPLNYNFGRNHHHRPHKKHDGSGDAGTICDDFPQGIPPPSTNTTSYLCVDRKGCCNFTTVQAAVNAVPDFSDKRTIIWINSGMYYEKVMVPKTKPNITFQGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGVEGAQAVAIRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGDARSLYENCQLVSIANPVSPGQRSINGAITAHGRVSMDENTGFVFVNCSIGGNGRIWLGRAWRPFSRVVFAFTAMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGLGASMTLRASYVQRLNDTQAFPFLNASYIDGDQWLEIYK* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0825 398 Pfam Pectinesterase 99 391 IPR000070 GO:0030599|GO:0042545
Lan16g0825 398 SUPERFAMILY Pectin lyase-like 95 396 IPR011050 -
Lan16g0825 398 Gene3D - 90 397 IPR012334 -
Lan16g0825 398 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 8 397 - -
Lan16g0825 398 ProSitePatterns Pectinesterase signature 2. 245 254 IPR033131 -
Lan16g0825 398 PANTHER PECTINESTERASE 8-RELATED 8 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0825 Lan-Chr16 14678995 14684930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0825 77 395 Carbohydrate Esterase AT1G05310 72.727 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0825 - - ahf:112696095 684.871