Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0822 ATGGCACATAAGAAATCTTTCTTATTAGGACAACAAGAACAAGAGCAAGAGACAAAGCTTTTAGGTTCTTCACTGATCATGGCTTCTGGTAGTGTTAAAAGCACCAACCCAACAACAACTACAACTCAACTTGAACCACTCCCACAACCTCGTCATAATCATCAACAACAACATCATCACCACTTTCATCAAATACAAGACAACCAAATCTCTTTTGGAATGATGCAATCTTCTTCTTCATCCACTATCCCAGGAAACTACTTAAGCATGGATTCTGGAGCTTATGATTTGGGTGAATTGGATCAAGCTCTTTTTCTTTATCTTGATGGACAAGCTGACCCTTCAAGTGTACAAGACCAAAGACAGAATTCATCATCATCAGGAATGAGGCCTCCAACTCTAAACATTTTCCCTTCTCAGCCTATGCACGCAGTGCCATCATCATCCAATTCCAAGGCTGGCATGGACTTAGTATCAACACAAACAAGTGGTTCCAAGAAACCATCAGAACCGTCAATGGAGTTGGCCAACCCAAGAAATGACACCACTTCTGCACCTGAACCTCCCAAAGCTGTCAAGCGAGTGACCAACCGCAAGGGACCAACATCAAGTTCTGAACATGAAGGACCTAAAACTCCAGATCCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAACTAGAGTCCAGTAGGATTAGGCTTAATCAGCTGGAACAAGAGCTACAACGTGCTAGAGCTCAAGGCATGTTCATTGGTGGAGGTGCAATTATGGGAGGAGAACAGCAAGGCCTTCCTGTATCTATGAATACCACTAGCTCAGAGGCTGCCATGTTTGATGTGGAATATGCAAGATGGCAAGAAGAGCATCATAGGCTAGTGTGCGAGCTAAGAGCTGCAGTTCAAGAACACGTTCCTGAGAATGAGCTTCGAATGTATGTGGATGGTTGCTTGGCACATTATGATCAAGTCATGAATCTCAAGAGCTTAGTAGCCAAAGCAGATGTATTTCATCTTGTTTCTGGCATGTGGAAAACCCCAGCTGAAAGATGCTTCTTGTGGATTGGTGGATTTAGACCATCAGAACTCATTAAGATTATTCTGAGCCAAATTGAACCTCTTTCGGAGCAACAAATATTGGGTATATGTGGGTTGCAACAATCTACACAAGAAGCAGAAGATGCTCTCTCGCAAGGGCTTGATGCTCTGAATCAATCTCTGTCGGACACTATTACATCTGACTCTTTGAGTTCTCCTCCCAACATGGCTAACTACATGGGGCAAATGGCAGTGGCCATGAACAAACTCTCCACTCTTGAAGGTTTTGTTAGACAGGCAGATAATCTGAGGCACCAAACAATTCATCGTCTGCATCAAATCCTAACGACACGCCAAGCAGCAAAGTGTTTATTGGCCATAGCAGAGTACATCCATCGTTTGAGAGCACTGAGTTCTCTATGGTTGGCACGCCCTCGCCAAGAATAG 1527 0.4381 MAHKKSFLLGQQEQEQETKLLGSSLIMASGSVKSTNPTTTTTQLEPLPQPRHNHQQQHHHHFHQIQDNQISFGMMQSSSSSTIPGNYLSMDSGAYDLGELDQALFLYLDGQADPSSVQDQRQNSSSSGMRPPTLNIFPSQPMHAVPSSSNSKAGMDLVSTQTSGSKKPSEPSMELANPRNDTTSAPEPPKAVKRVTNRKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARAQGMFIGGGAIMGGEQQGLPVSMNTTSSEAAMFDVEYARWQEEHHRLVCELRAAVQEHVPENELRMYVDGCLAHYDQVMNLKSLVAKADVFHLVSGMWKTPAERCFLWIGGFRPSELIKIILSQIEPLSEQQILGICGLQQSTQEAEDALSQGLDALNQSLSDTITSDSLSSPPNMANYMGQMAVAMNKLSTLEGFVRQADNLRHQTIHRLHQILTTRQAAKCLLAIAEYIHRLRALSSLWLARPRQE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0822 508 Pfam bZIP transcription factor 216 249 IPR004827 GO:0003700|GO:0006355
Lan16g0822 508 Gene3D - 215 264 - -
Lan16g0822 508 SUPERFAMILY Leucine zipper domain 216 258 IPR046347 GO:0003700|GO:0006355
Lan16g0822 508 MobiDBLite consensus disorder prediction 113 184 - -
Lan16g0822 508 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 219 234 IPR004827 GO:0003700|GO:0006355
Lan16g0822 508 SMART brlzneu 212 285 IPR004827 GO:0003700|GO:0006355
Lan16g0822 508 MobiDBLite consensus disorder prediction 113 219 - -
Lan16g0822 508 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 100 507 - -
Lan16g0822 508 MobiDBLite consensus disorder prediction 200 219 - -
Lan16g0822 508 Coils Coil 235 262 - -
Lan16g0822 508 Pfam Seed dormancy control 308 382 IPR025422 GO:0006351|GO:0043565
Lan16g0822 508 ProSiteProfiles DOG1 domain profile. 290 504 IPR025422 GO:0006351|GO:0043565
Lan16g0822 508 CDD bZIP_HBP1b-like 216 268 - -
Lan16g0822 508 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 214 258 IPR004827 GO:0003700|GO:0006355
Lan16g0822 508 PANTHER TRANSCRIPTION FACTOR TGA9 100 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0822 Lan-Chr16 14527402 14538040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0822 85 508 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.480 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan16g0822 DOG1 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0822 K14431 - gmx:100815176 754.207