Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0815 ATGCATCATCATCATCATTTTCTATTTCTATTACTACTTCACATTTTCCTCTTATTTTTCTTTCCTTCCACTTTCTCTCTAAACTCTGATGGTCTTTCCCTTCTAGCCCTCAAATCCGCTATAACCTTCGACCCAAACGGTGCTCTCAAAACCTGGTCCCAAACAGATCCAACTCCATGCAACTGGAACGGCGTCGTTTGCTTCCAAAACCGAGTCACCCAACTCGCTCTCCCTAACAACTCATTAACGGGTTACCTCCCTTCCGAACTCGGTCTCTTAACTTCACTCAAACGTCTCTCTCTTCCTCACAATAATTTCTCAAACTCAATCCCTATTAATCTCTTCAACGCAACAAACCTTGTCGTTTTGGATCTCTCTCATAATTCTCTCTCTGGTTTCATTCCTTCAGAAATTCACTCTCTACGGTTACTCCGCCACGTGGACATTTCCTCAAATTCTCTCACCGGTTCGCTACCGGAATCGCTATCTGAACTAATCGGACTCGTCGGAACACTGAATTTATCGTTTAACCATTTCTCCGGCGGAGTTCCGGCGTCACTGGGGAAGCTTCCGGTGGCTGTGAGTATTGATCTCCGGTATAATAACCTCACCGGAAAAATCCCTCAGGTTGGGTCGCTGCTGAACCAGGGCCCCACGGCGTTCTCCGGTAACCCTGGCCTCTGTGGTTTCCCTCTGCAGAACGCGTGTCCTGAAGCTGAGAAACCACCCGGCATTGTTACGAGTACACAATATGAGCCTCAAAATCCGAAAGCTGTGAGTTCCGGTGGCGAAGAGGAGAAAGGAACTGGTGGCAGTGGCGGTCGTGGTGGTTCTGTTGCGGTTGCGGTGATCTCTGGAATCTCGTTATTCGTTGCGGTTGTTTCGTTGTCACTATGGATTTTCCGGCGGAGGTTGAACGCGTTGGAGGAGGGTAATTTGCGGAAAGGGAAGTTGGAAATTGGGGTTGGTAATGATTTAGGAGGAGAAGGGCAAAATGGTAAATTCGTTGTGATTGATGAAGGATTTGGGTTAGAGTTGGAGGATTTGTTGAGAGCATCTGCTTATGTTGTTGGGAAGAGTAGGAGTGGGATTGTGTATAAGGTTGTCGGTGCCGGAAAAGGGTTGGGAGGTGCTGCATCGGCTACGGTGGTGGCCGTGCGGCGACTCAGCGAGGGCGACGATGCCACTTGGCGGTTCAAGGAGTTTGAGTCTGAGGTGGAAGCAATTGCAAGGATTCGTCACCCTAATGTTGTGCCTTTGAGAGCTTATTACTTTGCACATGATGAGAAATTGATTATCACTGATTTCATCAGAAATGGAAGTTTGTCAACTGCTTTACATGGCGGACCTTCCAATTCATTGCCACCATTATCATGGGCAGTGAGGTTAAAAATTGCTCAAGAAGCGGCAAGGGGCCTGACGTACATACACGAGTTCAGTGGTCGGAAATATGTCCACGGCAACCTAAAATCAACAAAAATCTTATTAGATGATGATCTCCGTCCTTACATATCAGGTTTTGGACTAACTCGACTTAGTTTGGGTACCACGAAGTGTACCACATTGGCACCAAAGCGGCAGAACTCAAACCAATCTTCCTTATCCTCTGCTATGGGTTCCATGACTGCTTCTAACTACTACTTGGCACCTGAGGTGCGCATGGCTGGTGGCAAATTCACACAAAAATGTGATGTGTATTCTTTTGGTCTAGTGTTGTTGGAACTTTTGACCGGTAAGCAGCATAATTTTGGACTTGAAAATGATGACATGGTGCTAGAGTGTTTTGTAAGGAAAGCATTCAAGGAGGAGCAGCCATTGTCTGAGATTATAGACCCAACACTTCTGCCTGAGGTTTATGCTAAAAAACAAGTTGTTGCTGCATTCCATGTTGCTCTGAACTGCACAGAACTTGATCCAGAATTGCGTCCTAGAATGAGAACGGTGTACGAGAGCCTTGATCGCATCAAAATACAATGA 1977 0.4648 MHHHHHFLFLLLLHIFLLFFFPSTFSLNSDGLSLLALKSAITFDPNGALKTWSQTDPTPCNWNGVVCFQNRVTQLALPNNSLTGYLPSELGLLTSLKRLSLPHNNFSNSIPINLFNATNLVVLDLSHNSLSGFIPSEIHSLRLLRHVDISSNSLTGSLPESLSELIGLVGTLNLSFNHFSGGVPASLGKLPVAVSIDLRYNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAEKPPGIVTSTQYEPQNPKAVSSGGEEEKGTGGSGGRGGSVAVAVISGISLFVAVVSLSLWIFRRRLNALEEGNLRKGKLEIGVGNDLGGEGQNGKFVVIDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGAGKGLGGAASATVVAVRRLSEGDDATWRFKEFESEVEAIARIRHPNVVPLRAYYFAHDEKLIITDFIRNGSLSTALHGGPSNSLPPLSWAVRLKIAQEAARGLTYIHEFSGRKYVHGNLKSTKILLDDDLRPYISGFGLTRLSLGTTKCTTLAPKRQNSNQSSLSSAMGSMTASNYYLAPEVRMAGGKFTQKCDVYSFGLVLLELLTGKQHNFGLENDDMVLECFVRKAFKEEQPLSEIIDPTLLPEVYAKKQVVAAFHVALNCTELDPELRPRMRTVYESLDRIKIQ* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0815 658 MobiDBLite consensus disorder prediction 246 275 - -
Lan16g0815 658 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 12 658 - -
Lan16g0815 658 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 658 - -
Lan16g0815 658 Gene3D Ribonuclease Inhibitor 26 169 IPR032675 -
Lan16g0815 658 Pfam Protein tyrosine and serine/threonine kinase 358 651 IPR001245 GO:0004672|GO:0006468
Lan16g0815 658 SUPERFAMILY Protein kinase-like (PK-like) 356 652 IPR011009 -
Lan16g0815 658 Gene3D Transferase(Phosphotransferase) domain 1 437 658 - -
Lan16g0815 658 ProSiteProfiles Protein kinase domain profile. 351 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0815 658 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lan16g0815 658 Gene3D Phosphorylase Kinase; domain 1 344 436 - -
Lan16g0815 658 Gene3D Ribonuclease Inhibitor 170 238 IPR032675 -
Lan16g0815 658 SUPERFAMILY L domain-like 30 233 - -
Lan16g0815 658 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0815 Lan-Chr16 14421638 14425247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0815 27 656 Receptor kinase-like Gene Family AT3G57830 58.760 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan16g0815 PK_Tyr_Ser-Thr 5.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0815 - - gmx:100796011 893.649