Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0779 ATGGCTGGGATTGATGATAATGTCACACTAGTTGGCGATTGGGGTGCTCCTAGTCAGAGCCCGAGAACCCTTTTTTCTAGAATGCTAGGTGAAGAGAATGTAACAAAATCAATCTCAGACCCTCTTGGAAGTGGTAGAACAGGGTTTATGTTTCCGGGGAATCACGAACAGGCTGAGACAGGGAAAGGAGACACAAAAGATAGCTCACAGGATGGTGATTCTGGTGAACAGTTGACCTACTCGACCTTTCTGGCTGATCAGAAATCAAACTCGAGAGGAGGTCTTGTTGAAAGGATGGCTGCTAGAGCTGGGTTTAATGCTCCGAGGTTAAATACAGAAAGCATTAGATCAACCGATCTTACACTTAATTCTGATATTCAGTCTCCTTATTTGACCATACCACCAGGTCTCAGTCCCACTACACTTTTGGAATCTCCGGTGTTCCTTGCAAACACACTGGCAGAGCCATCTCCAACAACTGGAAAGTTTCCATTCATCTCAAATGGCAATATGCGGTACTCAGAATTATCATCCGATGCTCCTGAAAAATCTAAAGAAAACCTTGATGATTTCTATGCATCATCCTTTGCTTTTAAGCCTGCAACAGATTCAGGCTCATCATTTTATTATGGTGCTGCAAGGAAAGTAAATCCAACTACAGTTCCTCAACAATCTGTTCCAGGTATTGAGGCCTCAGTTCAGTCAGAAAATTCTTTCCAATCTCAAAGTGTTGATGCACCCAAGGTTCAAACTGAGAACGAGAGCAGCCTCCATCATCAGCCCGACTTTATCGAGTCGTCACCTCAAAAAGATAATGGAATTAAATCTTTCTCAGGTGATCAAAGGGCATATAATACTGTTGGTGGTAGCATTGAGCGTTCCACACCACCTGAAGAGCAAGCAGATGAAGCCGGAGATCAAAGAGGGAATGGAGACTCAACGGTTGCTGGTGTTGGTGGTACACTGGCTGAAGATGGATATAACTGGAGAAAATATGGTCAAAAGCAAGTTAAGGGCAGCGAGTATCCGCGAAGTTACTATAAGTGTACACATCCAAATTGTCTGGTTAAGAAGAAAGTTGAACGATCTCACGAGGGCCACATGACAGAGATTATCTATAAAGGAGCACACAACCATTCCAAACCAACTCTAAATCGTCGGTCCGGCATGGGATCAGCCAACCCTAATGCGGACATGCAAGTGGATAATCCTGAACAAGTTGAACCACAGAACGGTGATAATGGTGACCTGGGCTGGGCTAATGTACACAAGGGAATTGTAGCTGGAGCGGCTAATTGGAAGCATGACAACCCTGAAGGGACCTCTTCAGCATCTATTGGCCCTGAATACCGCAACCACTCCACCAATTTGCAGACTCAGAATGGTACTCACCTTGATTCTGGAGATGCATTGGATGCCTCTTCTACTTTTTCTAATGAAGAAGATGAAGATGACCGAGGCACTCATGGTAGTGTCTCGTTAGGTTATGATGGGGAAGGAGATGAATCTGAGTCTAAAAGAAGGAAACTGGAATCTTACGCAACAGAGCTGAGTGGAGCTACAAGAGCTATTCGCGAGCCTAGAGTTGTTGTACAGACTACCAGTGAGGTAGATATCCTCGATGATGGCTATCGATGGCGAAAGTATGGGCAAAAAGTTGTTAAAGGAAATCCCAATCCCAGGAGTTACTATAAGTGCACAAGCGCTGGCTGCACGGTGAGGAAGCATGTCGAGAGAGCATCGCATGACCTCAAATCTGTGATCACTACTTACGAGGGAAAGCACAATCACGACGTTCCTGCTGCTCGTGCTAGCAGCCATGTCAATGCTGCCACATCTAGCGCTGTTCCTGGGCAAGGTCATGTTCATAGACCTGAATCGTCGCAAATTCACAATGGAATTGGAAGGCTCGAGAGGCCTTCGATGGGCTCATTCAACTTACCTGGGAGGCAGCAGCTAGGACCTTCCCATGGCTTCTCCTTCGGTATGAATCATCAACCCATGTTCTCAAATCTGGCAATGCCAGGATTCGGACCGGGGCAAGGAAAACATCCTGGTATGCCGGTTCATCCATTCCTGGCACAACAACAGCAGCGCCCTACGGCAAATGAAATGGGTTTTATGTTACCGAAGGGAGAACCAAATGTGGAAGCTATTCCTGAACGTGGCTCATCACTATATCAAGAAATTATGAATCACATGCCTCTTGGACCTCATATGTAA 2223 0.4575 MAGIDDNVTLVGDWGAPSQSPRTLFSRMLGEENVTKSISDPLGSGRTGFMFPGNHEQAETGKGDTKDSSQDGDSGEQLTYSTFLADQKSNSRGGLVERMAARAGFNAPRLNTESIRSTDLTLNSDIQSPYLTIPPGLSPTTLLESPVFLANTLAEPSPTTGKFPFISNGNMRYSELSSDAPEKSKENLDDFYASSFAFKPATDSGSSFYYGAARKVNPTTVPQQSVPGIEASVQSENSFQSQSVDAPKVQTENESSLHHQPDFIESSPQKDNGIKSFSGDQRAYNTVGGSIERSTPPEEQADEAGDQRGNGDSTVAGVGGTLAEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCLVKKKVERSHEGHMTEIIYKGAHNHSKPTLNRRSGMGSANPNADMQVDNPEQVEPQNGDNGDLGWANVHKGIVAGAANWKHDNPEGTSSASIGPEYRNHSTNLQTQNGTHLDSGDALDASSTFSNEEDEDDRGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNAATSSAVPGQGHVHRPESSQIHNGIGRLERPSMGSFNLPGRQQLGPSHGFSFGMNHQPMFSNLAMPGFGPGQGKHPGMPVHPFLAQQQQRPTANEMGFMLPKGEPNVEAIPERGSSLYQEIMNHMPLGPHM* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0779 740 Gene3D WRKY domain 318 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 MobiDBLite consensus disorder prediction 1 20 - -
Lan16g0779 740 MobiDBLite consensus disorder prediction 378 512 - -
Lan16g0779 740 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 618 IPR044810 GO:0003700
Lan16g0779 740 MobiDBLite consensus disorder prediction 382 410 - -
Lan16g0779 740 Pfam WRKY DNA -binding domain 324 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 Pfam WRKY DNA -binding domain 541 597 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 ProSiteProfiles WRKY domain profile. 535 600 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 SMART WRKY_cls 540 599 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 SMART WRKY_cls 323 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 SUPERFAMILY WRKY DNA-binding domain 321 382 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 ProSiteProfiles WRKY domain profile. 318 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 MobiDBLite consensus disorder prediction 231 321 - -
Lan16g0779 740 Gene3D WRKY domain 527 593 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 99 618 - -
Lan16g0779 740 SUPERFAMILY WRKY DNA-binding domain 532 600 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0779 740 MobiDBLite consensus disorder prediction 36 76 - -
Lan16g0779 740 MobiDBLite consensus disorder prediction 436 475 - -
Lan16g0779 740 MobiDBLite consensus disorder prediction 231 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0779 Lan-Chr16 13675387 13680281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0779 1 735 WRKY Transcription Factor Family AT5G56270 49.475 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan16g0779 WRKY 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0779 K18835 - gmx:100127395 1158.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1096 4 16481020 16485635 Lan16g0779 16 13675387 13680281 LSH
Lan2g0177 2 1489780 1494286 Lan16g0779 16 13675387 13680281 LSH