Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0745 ATGGATCCTGGTGAATCATTGCCACCTCCACCATCAACAATTCCTTCAAATGTTGTTCATACGAAAGCAGCTTTATTAAAAGCATACGAGCCGGCGAACAAAACACTCGTCACGAATCGTTTGCCTATGGCTAGGAGAGGTAATGGAACCAAGGGACAGAAGATACAGCTGCTAACTAACCATTTCAGAGTTGGCATGGGAAAGAATGATGGCTTCTTCTATCACTATAGTGTTGCGTTGATGTACGAGGATGGGCGTCCTGTCGAAGCCATGGGCATTGGGAGAAAGGTTATTGATAAAATTTCTGAAACATATGATGAGTTGCAAAGCAAGAATTTTGCATATGATGGTGAGAAAAGTCTATTCACCCTTGGTGCATTACCGGATAAGAAGCTTAATTTCACTGCTGTGTTGGATGAAGTTTCGTCCAAGAGGATTGGAATGGATGGAAGCCCGGAAAACTTTAATAAAGAAGGAAAAGACAAGAGAATGCGGCGTGCTTCTCAGTCCAAAACATTCAAGGTGGAGATAAGTTATGCAGCCAAAATCCCACTGCAAGCAATTCCAAATGCATTGCGGGGTCAAGATTCCGAACACTTCCAGGAAGCAGTGAGGGTTTTGGACATCATACTTAGGCAGCATGCATCAAAGAAGGGCTGTCTCCTTGTTCGGCAGTCATTCTTCCATGACAATCCAAGGAATTACACTGACATTGGAGGTGGTGTTCTTAGTTGCCGTGGTTTCCATTCAAGCTTCCGAGCCACTCAAGGAGGACTATCTCTGAACATTGATGTCTCAAATACAATGATTCTCAAGCCTGGCTCGGTACTGGACTTCCTCTGTGAAAATCAAAATGTTAGGCATCCAAACATGATTGATTGGGCTAAGGCCAAGAGAATGCTAAAAAACCTCAGGATAAAGGCTAATAATATTGAGTACAAAATCACTGGATTGAGTGACAATTCCTGCAGAAATCAAATATTTTCATTGAAACAAGGAAAGGATTCAAATGGTGACGTCCAAACAATCGAAATTACTGTTTATGAGTACTTTAAACGCCATAAGAAGCTCGATATGCATAAATCTGCTGACTTCCCATGCATAAACGTTGGAAAACCAAAGCGCCCATCTTTTTTTCCAGTCGAGCTATGCACCTTGGTCTCATTGCAGAGATACACAAAGGCACTCACAAATTTGCAAAGGGCTCAGCTTGTAGAGAAGTCAAGGCAAAAGCCCAACGAAAGGAAAGCAGCTTTGATTGATTCCTTAAGAAACAGCCGATATGAAAATGATCCGATGCTTCGTTCTTGTGGAATTACCATTGAACCTGACTTCACTAGAATCGATGGCCGGGTACTGCAACCCCCAAGGCTTAGAGTTGGAAATGGGGAGGACTTTGTGCCGCGAAATGGTCGCTGGAACTTCAACAACAAGAAACTAGTTGATCCTGTGAAGATTGAGCGTTGGGCCATTGTTAACTTCTCAGCTCGGTGTGATACACGTTACCTATGTGATACCCTCAAGAAATGTGCTGCAAATAAAGGGATTCACATAAGTCCACCATTTCGGGTATTTGAAGAGGATAATCGCTCCGCACGTGATCCAGCGCCTGTGAGGGTTGAGAAAATGTTTGGTACTGTAAAGTCCATGCTGCCTGGCCCCCCTCAACTTCTGTTGTGTATTCTTCCACAGAGAAAAAATTCTGACATTTATGGCCCATGGAAAAGGAGAAGTCTCGCTGAGGAAGGTGTTGCAACACAATGCATTGCCCCAACAAAAATTAATGACCAGTACATTACAAATGTTCTCTTAAAGGTTAATGCAAAGCTTGGTGGCATGAATTCCTTTCTTGCTGTAGAGCCTTCACATTCTATACCTTTAGTTTCAAGTGTACCTACATTAATTATTGGTATGGATGTTTCGCACGGATCTCCTGGTCGATCAGACGTGCCTTCTATTGCGGCGGTTGTCAGCTCAAGATGCTGGCCTCTTATCTCACGTTATAGAGCCGCAGTTCGCACTCAGTCATCAAGAGTCGAAATGATACAGTCTTTATTCAAGCCTGTTTCTGATACTGCGGATGAAGGTATCATGAGGGAGCTGCTTCTGGACTTTGAAATAACTTCAGGAAAAAGGAAGCCTCAACACATTATAATTTTCAGGGATGGAGTGAGTGAATCACAGTTCAATCAAGTCCTAAACCATGAGTTGAATGACATCATTAAGGCATGTGAACATCTTGATGAAAGCTGGTCTCCAAAGTTCACTGTGATTATTGCCCAGAAGAATCACCACACCAAGTTCTTCCAAGCAAATTCTCCTGATAATGTTCCACCAGGCACTGTTATAGACAACAAAATCTGTCATCCACATAACAATGACTTCTATCTGTGTGCTCAGGCTGGTATGATTGGGACAACTAGACCTACACATTACCATGTTCTGCATGATGAGATTGGATTCTCAGCTGATGATTTGCAAGAACTGGTTCATTCCCTATCTTATGTTTATCAGAGGAGCACTACTGCAATATCAGTTGTTGCCCCTATTTGCTATGCACATTTGGCAGCTGCTCAGATGGGACAGTTTATGAAGTTTGATGAATTCTCTGAGACATCTTCAAGTCATGGTGGAATGACATCTATTGTTGCACCACAAGTTCCTCAATTACCCCCTCTTCATCAAGATGTCACCAATTCCATGTTCTTTTGTTAA 2715 0.4262 MDPGESLPPPPSTIPSNVVHTKAALLKAYEPANKTLVTNRLPMARRGNGTKGQKIQLLTNHFRVGMGKNDGFFYHYSVALMYEDGRPVEAMGIGRKVIDKISETYDELQSKNFAYDGEKSLFTLGALPDKKLNFTAVLDEVSSKRIGMDGSPENFNKEGKDKRMRRASQSKTFKVEISYAAKIPLQAIPNALRGQDSEHFQEAVRVLDIILRQHASKKGCLLVRQSFFHDNPRNYTDIGGGVLSCRGFHSSFRATQGGLSLNIDVSNTMILKPGSVLDFLCENQNVRHPNMIDWAKAKRMLKNLRIKANNIEYKITGLSDNSCRNQIFSLKQGKDSNGDVQTIEITVYEYFKRHKKLDMHKSADFPCINVGKPKRPSFFPVELCTLVSLQRYTKALTNLQRAQLVEKSRQKPNERKAALIDSLRNSRYENDPMLRSCGITIEPDFTRIDGRVLQPPRLRVGNGEDFVPRNGRWNFNNKKLVDPVKIERWAIVNFSARCDTRYLCDTLKKCAANKGIHISPPFRVFEEDNRSARDPAPVRVEKMFGTVKSMLPGPPQLLLCILPQRKNSDIYGPWKRRSLAEEGVATQCIAPTKINDQYITNVLLKVNAKLGGMNSFLAVEPSHSIPLVSSVPTLIIGMDVSHGSPGRSDVPSIAAVVSSRCWPLISRYRAAVRTQSSRVEMIQSLFKPVSDTADEGIMRELLLDFEITSGKRKPQHIIIFRDGVSESQFNQVLNHELNDIIKACEHLDESWSPKFTVIIAQKNHHTKFFQANSPDNVPPGTVIDNKICHPHNNDFYLCAQAGMIGTTRPTHYHVLHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFDEFSETSSSHGGMTSIVAPQVPQLPPLHQDVTNSMFFC* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0745 904 Pfam PAZ domain 277 404 IPR003100 GO:0005515
Lan16g0745 904 CDD Piwi_ago-like 432 859 IPR045246 -
Lan16g0745 904 Gene3D paz domain 267 392 - -
Lan16g0745 904 Pfam Mid domain of argonaute 468 530 IPR032473 -
Lan16g0745 904 Gene3D - 452 618 - -
Lan16g0745 904 MobiDBLite consensus disorder prediction 148 167 - -
Lan16g0745 904 ProSiteProfiles PAZ domain profile. 313 388 IPR003100 GO:0005515
Lan16g0745 904 SUPERFAMILY PAZ domain 268 427 IPR036085 GO:0005515
Lan16g0745 904 SMART DUF1785_2 221 273 IPR014811 -
Lan16g0745 904 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 5 903 - -
Lan16g0745 904 SUPERFAMILY Ribonuclease H-like 542 863 IPR012337 -
Lan16g0745 904 Pfam Argonaute linker 1 domain 223 270 IPR014811 -
Lan16g0745 904 Gene3D - 624 904 IPR036397 GO:0003676
Lan16g0745 904 SMART Piwi_a_2 557 865 IPR003165 GO:0003676
Lan16g0745 904 Pfam N-terminal domain of argonaute 53 211 IPR032474 -
Lan16g0745 904 Pfam Argonaute linker 2 domain 414 459 IPR032472 -
Lan16g0745 904 Pfam Piwi domain 558 865 IPR003165 GO:0003676
Lan16g0745 904 ProSiteProfiles Piwi domain profile. 557 865 IPR003165 GO:0003676
Lan16g0745 904 CDD PAZ_argonaute_like 273 387 - -
Lan16g0745 904 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 5 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0745 Lan-Chr16 11908707 11918002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0745 45 904 Eukaryotic Initiation Factors Gene Family AT5G43810 35.405 4.17e-157 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0745 K11593 - vvi:100241029 1300.03