Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0740 ATGGCTTCAATGAATGACCAAAGTGCAATTGAGCTCCTTAATGGTGAAGCTATCCTACACAGCCAGTTATTCAGCTTCATAAGACCAATGTGTCTTAAATGGGCTGTGGAACTTGGCATAGCAGATATAATCCACAACCATGCCAAACCTATCACTTTTCCTGAGTTGATGTTAGTCCTAGTGCAAGTTCCACCAACTAAAGCTTCTTTAGTGAAACGTTTCATGCGTTTTCTTGCATATAATGGAATCTTTGCAATCCATGAAAGCCAAGAAGAACAACATGAAACATATAGTTTGACCCCAGCATCAAAGCTTCTTGTCAAAGGCAGTGATCATTGTTTAACTCCATTTGTTGTTTGGGCTACAGATCCTGTTAGGATGAATAACTATCATCACTTAGGGAATTGGGTTTGTGGTGAAGTTCCTACATTATATGAAACTTCCTTAGGAATAAGTATTCGGGAATATCTTGATAAAAACCCTGAATATATGAGTACCTTTAATGAGGGTATGGCTAGTGATTGTAAACTACTGCAGTTGACTTTGAAAGATTGTAGTTGTGTTTTTGAAGGATTAGATACCATTGTTGATGTAGGTGGTGGAAATGGAACCACAGCAAAAATTATTTCTGAGTTATTCCGTAAGTTGAAATTTGTTGTATTTGACCTTCCACAGGTTGTAGCAAACTTGTCAGGAAGCAATAATGTGAGTTACGTTGCTGGTGACATGTTTGTTTCTATCCCTCAAGCTGATGCAGTTCTTCTAAAGAGGATTTTGCACGATTGGACTGATGAGAATTGCATAAAGATCCTTAAAAAATGTAAAAATTCTATTTCAAGCAGAAAAGGAAAAGTGATTATTATAGAGGCAATAATAAATGAAAAGCAAGAAGACAAAGTTCTGACTGAAACAAAGCTGAGTGTGGATATAATGATGATGACTATTAATGGAAAAGAGAGAACTGAAAAAGAATGGAAGGAACTCTTTGTTGCAGCAGGATTCAAACACTACAAAATATTTCCTTTACATGGTTTGAGATCTCTTATTGAGGTCTATCCCTAA 1062 0.3635 MASMNDQSAIELLNGEAILHSQLFSFIRPMCLKWAVELGIADIIHNHAKPITFPELMLVLVQVPPTKASLVKRFMRFLAYNGIFAIHESQEEQHETYSLTPASKLLVKGSDHCLTPFVVWATDPVRMNNYHHLGNWVCGEVPTLYETSLGISIREYLDKNPEYMSTFNEGMASDCKLLQLTLKDCSCVFEGLDTIVDVGGGNGTTAKIISELFRKLKFVVFDLPQVVANLSGSNNVSYVAGDMFVSIPQADAVLLKRILHDWTDENCIKILKKCKNSISSRKGKVIIIEAIINEKQEDKVLTETKLSVDIMMMTINGKERTEKEWKELFVAAGFKHYKIFPLHGLRSLIEVYP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0740 353 Gene3D - 1 106 IPR036388 -
Lan16g0740 353 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
Lan16g0740 353 PANTHER O-METHYLTRANSFERASE 2 352 IPR016461 GO:0008168
Lan16g0740 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Lan16g0740 353 Gene3D Vaccinia Virus protein VP39 107 353 IPR029063 -
Lan16g0740 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 353 IPR016461 GO:0008168
Lan16g0740 353 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 352 - -
Lan16g0740 353 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Lan16g0740 353 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Lan16g0740 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0740 Lan-Chr16 11788778 11790624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0740 8 339 Monolignol Biosynthesis Gene Families AT5G54160 33.724 3.03e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0740 K22588 - gmx:100819796 479.944