Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0738 ATGGAGTGCAATAAGGATGAGGCTATCAGAGCTAAAGAAATTGCAGAGAAAAAGTTTGCTGCAAAGGATATTTTTGGTGCAAAGAAATTTGCTTTAAAGGCTCAAAATTTATATCCCAATCTTGAGGGTATTTCTCAATTGATAATAACATTTGATGTATATATTTCTACAAAGAATAGAATAACTGGGGAACCAGATTGGTATGGTATACTTGGCATGGATCGCTTCATTGATGAAAACACACTGAGAAAACAATATAGAAAGCTAGCCTTTGAGCTTCACCCAGATAAGAACAAGTCCATTGGTGCACATGGTGCATTTATCCTTATTTCTGAGGCATGGAAAATACTATCAGATAAGGGTAAAAGGGTAGCATATGATGAGAAGATAAATGCAAAAGGATCTAAAGTTTCAACTAATAAGGGTGCAAGTTTATCAGCAGAAAACAACACTTCTTCATGTGCAAGCAATGATCAGAAAAAAGTTCCTAAAGAAGAAAATGCATTCTCAAGTTTTTGTTCTGCGGATCCATATGAAATTGAAAAATTGATTCAGGAGGTGTTAGAGGAAGAGAAACGAAAACGTGGAGAGAGAAAAGCTGCAAGGATGAAGCATTTACGCATGTTTTGTGTGTGTAGTTGGACACGATGA 651 0.3594 MECNKDEAIRAKEIAEKKFAAKDIFGAKKFALKAQNLYPNLEGISQLIITFDVYISTKNRITGEPDWYGILGMDRFIDENTLRKQYRKLAFELHPDKNKSIGAHGAFILISEAWKILSDKGKRVAYDEKINAKGSKVSTNKGASLSAENNTSSCASNDQKKVPKEENAFSSFCSADPYEIEKLIQEVLEEEKRKRGERKAARMKHLRMFCVCSWTR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0738 216 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lan16g0738 216 PANTHER BNAC03G44070D PROTEIN 1 178 - -
Lan16g0738 216 MobiDBLite consensus disorder prediction 138 160 - -
Lan16g0738 216 CDD DnaJ 66 119 IPR001623 -
Lan16g0738 216 Coils Coil 180 200 - -
Lan16g0738 216 SUPERFAMILY Chaperone J-domain 55 126 IPR036869 -
Lan16g0738 216 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lan16g0738 216 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lan16g0738 216 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lan16g0738 216 MobiDBLite consensus disorder prediction 138 158 - -
Lan16g0738 216 Pfam DnaJ domain 66 127 IPR001623 -
Lan16g0738 216 Gene3D DnaJ domain 63 201 IPR036869 -
Lan16g0738 216 PANTHER HEAT SHOCK PROTEIN-LIKE 1 178 - -
Lan16g0738 216 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0738 Lan-Chr16 11765486 11767876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0738 4 140 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.860 4.70e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0738 - - lang:109329175 401.364