Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0721 ATGTTTTCTTTAACACTCACAAATGGGGTTCCTTCAAAATCCCACTTTTCTCACCGAACTCATCATTTTCATCGAACACATCATTTCCTTCACTTTCCATTGATCAAAAACCCTTCATCTTCTTCGTTTTCTTCACCTATTCGGTGCGGTATCCGCGAGCTTCGAGAGCGAATCGAAACTGTGAAGAACACCCAAAAGATCACCGAAGCGATGAAGCTCGTCGCCGCTGCAAGGGTCCGCCGAGCCCAAGAAGCAGTCATCAACGGAAGACCCTTCTCACAGACACTTGTTGAAGTTTTGCAAGATATCAACCAAAGGCTCCGAATTGAAGAAATTGATGTTCCCCTCACCAACGTTAGACCCGTTAAGAAGGTTGCCCTTGTTGTCATAACTGGTGACCGTGGTCTTTGTGGCGGTTTCAACAATGCAGTGACGAAAAAAGCGGAGGCCAGAATCAGAGAGTTGAAGAGTCTTGGTTTGGATTGTGTCGTGATTAGTATTGGCAAAAAGGGTAATTCATTTTTCAAGAGTAGGAATTTTGTTCAGGTTGATAGGTTTATTGAAGGTGGAAGTTTTCCAACTACAAAGGAAGCTCAAGCTATAGCGGATGATGTTTTTGCACTTTTTGTCAGTGAGGATGTTGATAAGGTTGAGCTTGTGTACACTAAGTTTATGTCTTTGGTTAAGTTTGATCCAGTGATTCATACATTGTTGCCATTGTCAACAAAAGGAGAGGTTCGTGATGTGAATGGGAACTGTATTGATGCGATGGAGGATGAGTTTTTCAGGTTGACTACTAAGCAAGGAAAGTTGGCTTTGGAGAGGGATGTTGTGGATAGGAAGAGAGGTGAATGCTTGCCACTTATGCAATTTGAACAAGATCCGGTTCAGATTCTTGATGCGATGATGCCTCTTTATCTGAACAGTCAGATTTTGAGGGGCTTGCAAGAATCACTGGCTAGTGAGCTTGCTGCAAGAATGAATGCCATGTCTAATGCCACTGAAAATGCAATTGAGTTAAAGAAGAATTTCTCAATGGCCTACAACCGAGAACGACAGGCAAAGATCACAGGGGAGCTGTTAGAGATTGTGGCTGGAGCTGAGGCACTAACACCAATTGATTGA 1125 0.432 MFSLTLTNGVPSKSHFSHRTHHFHRTHHFLHFPLIKNPSSSSFSSPIRCGIRELRERIETVKNTQKITEAMKLVAAARVRRAQEAVINGRPFSQTLVEVLQDINQRLRIEEIDVPLTNVRPVKKVALVVITGDRGLCGGFNNAVTKKAEARIRELKSLGLDCVVISIGKKGNSFFKSRNFVQVDRFIEGGSFPTTKEAQAIADDVFALFVSEDVDKVELVYTKFMSLVKFDPVIHTLLPLSTKGEVRDVNGNCIDAMEDEFFRLTTKQGKLALERDVVDRKRGECLPLMQFEQDPVQILDAMMPLYLNSQILRGLQESLASELAARMNAMSNATENAIELKKNFSMAYNRERQAKITGELLEIVAGAEALTPID* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0721 374 Gene3D ATP synthase, gamma subunit, helix hairpin domain 271 370 - -
Lan16g0721 374 Gene3D - 118 242 - -
Lan16g0721 374 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 51 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 Hamap ATP synthase gamma chain [atpG]. 48 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 ProSitePatterns ATP synthase gamma subunit signature. 356 369 IPR023632 -
Lan16g0721 374 Gene3D ATP synthase, gamma subunit, helix hairpin domain 50 117 - -
Lan16g0721 374 Coils Coil 51 71 - -
Lan16g0721 374 Pfam ATP synthase 51 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 5 370 - -
Lan16g0721 374 PANTHER ATP SYNTHASE GAMMA CHAIN 5 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 CDD F1-ATPase_gamma 51 367 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 PRINTS ATP synthase gamma subunit signature 122 141 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 PRINTS ATP synthase gamma subunit signature 215 232 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 PRINTS ATP synthase gamma subunit signature 317 336 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 PRINTS ATP synthase gamma subunit signature 348 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan16g0721 374 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 50 370 IPR035968 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0721 Lan-Chr16 10957958 10960183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0721 31 370 Primary Pumps ATPases AT1G15700 73.487 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0721 K02115 - qsu:112000322 526.554