Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0720 ATGAATATTACAACCATTAACGATGCATCAAATGATGAAAATGGTTTAGTGTCAATGATTAGTGTCAGCGGTGGTGGTGGTCATAGTGTGGTGGAAGAGGTGGCTCTTAAGAAGGGTCCTTGGACAACGACAGAGGATGCTATTCTCATAGACTATGTGACAAATCATGGTGAAGGAAACTGGAATGCGGTGCAAAGGAATACATGGTTGGCTCGATGTGGCAAGAGTTGTAGGCTTAGATGGGCTAACCATTTGAGACCAAATTTGAAGAAGGGTTCTTTCTCTCATGATGAAGAGAAACTCATTGTTCTGTTCCATTCACAGTTTGGTAACAAATGGGCTCGAATGGCTGCTTTGTTACCTGGGAGAACAGATAATGAAATCAAGAACTACTGGAATACAAGGGTGAAGCGACATCACAGACAAGGTCTTCCACTATATTTAGATGAGCATGATCAACCTACAACACCAACAGCCTCTTCTCCGTGTGTCACCCCAACAGGATCAAACACAAATACAGTCACAGATTTTGATTTTCTCCATCAAAACCATCACCACCATCACACCGTATTTAAATTGTCTCCAGTATTGGACCATCCAATACTCGAAACTGAACTCCACCACCACAGTCCAATCTCTCCAAAAGCACAACCATCTCATCATCCTCCTTTCTCTTCACCACCTTCCTATTCCCCTCACCATTTCATGGACCCTACACCCTCTAATTCCAATCCACAACTTTCCTCTTTATCCTTCACCTTCCAAAAACCAACTCCAGTTCTTGATAGCGCTCTTCGATTCAAACGCTACCGCTCCTACCCAAACTTCAGCCTCTACCATCTTCCTTCCATCACCCCTTATTCCACCTCTGCACCCCTTGATCAGATAGCTGATCTTGATGCATTCAGGTTCCCACAACAGAACAACTCCAGTTTTTCTCCTCAGTATTTTCAGACCCCATTGTTAGATTACGAACGAATGGTTTTGCCCTCAAATTTTGTTTTCTCATCCAAATTGGAGCACCCTTCAGACCAACTTTCACAGCCACTACTACAACCAGAGGTTAAGCATCATGATATAGCAACTTTTGAAACCAATAGTGGGTTGCTGGGGGATTTTATATTCGATGCTCAGGCACTAGCATCTGGCCAGAACTCAAAGAAACGAAATTATTTTAGCTTAAACGAAGGAAATGATGTGTTTGAGGGATACCAAAACTTTGAGGACTGTCCTCTTACCTCTACTTACTGGTTTTCTACTTCAGGAGTGAATCCAAAGGAAGAAGCATCAGACCTTAGCAAATCCATGAATGAGGACATCTCAAAATTCCTTACAGTAATGCCTTCCACAATGCAGGGTACAGAAGGGAACAATAACAGTGAGGCAGAAGTCTCCAATGTCCAATCTTCCACTGTCATAACAGATGACAATTTTGGACTTGATATGAAGCCCATAGCTTCCTTGTTTCCTCTCTCCAATGCAACAAACCATAATGAAAACCAAGGCTATTACTATTATTGGGACAATTTACCTGGTCTCTGCTGA 1545 0.4246 MNITTINDASNDENGLVSMISVSGGGGHSVVEEVALKKGPWTTTEDAILIDYVTNHGEGNWNAVQRNTWLARCGKSCRLRWANHLRPNLKKGSFSHDEEKLIVLFHSQFGNKWARMAALLPGRTDNEIKNYWNTRVKRHHRQGLPLYLDEHDQPTTPTASSPCVTPTGSNTNTVTDFDFLHQNHHHHHTVFKLSPVLDHPILETELHHHSPISPKAQPSHHPPFSSPPSYSPHHFMDPTPSNSNPQLSSLSFTFQKPTPVLDSALRFKRYRSYPNFSLYHLPSITPYSTSAPLDQIADLDAFRFPQQNNSSFSPQYFQTPLLDYERMVLPSNFVFSSKLEHPSDQLSQPLLQPEVKHHDIATFETNSGLLGDFIFDAQALASGQNSKKRNYFSLNEGNDVFEGYQNFEDCPLTSTYWFSTSGVNPKEEASDLSKSMNEDISKFLTVMPSTMQGTEGNNNSEAEVSNVQSSTVITDDNFGLDMKPIASLFPLSNATNHNENQGYYYYWDNLPGLC* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0720 514 CDD SANT 40 85 IPR001005 -
Lan16g0720 514 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Lan16g0720 514 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Lan16g0720 514 MobiDBLite consensus disorder prediction 235 250 - -
Lan16g0720 514 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 15 491 - -
Lan16g0720 514 SMART sant 90 138 IPR001005 -
Lan16g0720 514 SMART sant 37 87 IPR001005 -
Lan16g0720 514 SUPERFAMILY Homeodomain-like 36 132 IPR009057 -
Lan16g0720 514 CDD SANT 93 134 IPR001005 -
Lan16g0720 514 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Lan16g0720 514 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Lan16g0720 514 MobiDBLite consensus disorder prediction 210 250 - -
Lan16g0720 514 Gene3D - 30 91 - -
Lan16g0720 514 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Lan16g0720 514 Gene3D - 93 139 - -
Lan16g0720 514 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0720 Lan-Chr16 10911532 10914494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0720 369 514 MYB Transcription Factor Family AT4G26930 30.872 8.06e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan16g0720 Myb_DNA-bind_6 3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0720 - - lang:109329119 1024.23