Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0715 ATGGGAGGTAGAATAATACTAAGTGGTGGCCGTGATGCAATTCCAATTCTTGGGAATGGAAATATGAAGGCAACAATTCCTTCTTTGTTTCGATCAGGTCCTCCTTTGACAGCCATAGACAGGTTCTTATGGGGTCAACAACAACAACAACAGCAACCTCATAATAATGTTGCAAGGAACACTCATGCAATTGTTTTTGATGATGAGTTCTACAAGGTTGCTTGCTCTGGTGGTGGTTCAACCTTTAGGTTTGTGTGGCCTAATTACACTCAAGAAGGGAGCTTCTATGATGAAATCATTGCAAATGAAGAAGCTTTGAACTGGGAAAACCACTTCGCCACAACTTGTCAGAATGAAAATGTCCTTGCTTTAAGGAAGAATATGAAGGTGGTGAGGAGAAAGCCTAAGAATGGGTCATCTATGTTTTTGATCAAAGGACAGTGGACTGCTGAAGAAGATAGGAAACTTTTGAAGTTGGTGAAGCAACATGGTGTAACAAAATGGTCTCAAATAGCTGAGAAGTTGGAGGGAAGGGCTGGTAAGCAGTGTAGAGAAAGATGGCATAATCATTTGAGGCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATCCTGGTAGAAACCCATGCAAAGGTTGGAAATCGTTGGGCAGAGATAGCAAAGATCATTCCTGGAAGAACTGAGAATGCCATAAAGAATCATTGGAATGCCACTAAAAGGAGACAGAACTCAAGGAGAAAGAACAAAAGGCCAGCTACCTCAAATGGAAAGCCACAACCAACAATTCTTCAAGACTATATCAAACACAAGACTCTTACCACTCCTTCTACCTCTACCACAGAAACCTCTGAGGAAACTGCAGCTGCAGCAGCAAGCCAATTAAGCCTCTTGTTATCTCAACCTTCTGAGTCTGTGACAACTGAAAATAATACCTTATCACCACCATTCACAGAGGAATCACATGATGATGAGTTACTCTTCATGCAAGAACTTTTCAAGGAGAATAACTTTCAGACCCAGCAACATGTTAATGTTGCTGAAAGTGTTAATCACTCCAAGACTGAGGGTTATTATTGCCAAACTAATAATAATGGTAATCAGGTTCATACTGTGACCGAGTTTGGGTTTGTCAATTCCAACCCAAACCCTAACCCAAACAACAACATGGTCTATGATGAGACTCTCATTTCTAGAAAGACTCCGACCAATTACCTTGATCTCTATGTCTCACACTTGCTGAATGGTGCTGCAAGTTCTTCTTCATCAATTTTCTGCGATTATGGTAATAAGAATCTTAACACTGATTTGAAGCTGGGGGATGATCAAGACTTCTCAGAAGGAAAAAGAGAGATGGATTTGATAGAGATGGTTTGCTCCAAAAGTTATAATTTCTACTAG 1407 0.4037 MGGRIILSGGRDAIPILGNGNMKATIPSLFRSGPPLTAIDRFLWGQQQQQQQPHNNVARNTHAIVFDDEFYKVACSGGGSTFRFVWPNYTQEGSFYDEIIANEEALNWENHFATTCQNENVLALRKNMKVVRRKPKNGSSMFLIKGQWTAEEDRKLLKLVKQHGVTKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAKVGNRWAEIAKIIPGRTENAIKNHWNATKRRQNSRRKNKRPATSNGKPQPTILQDYIKHKTLTTPSTSTTETSEETAAAAASQLSLLLSQPSESVTTENNTLSPPFTEESHDDELLFMQELFKENNFQTQQHVNVAESVNHSKTEGYYCQTNNNGNQVHTVTEFGFVNSNPNPNPNNNMVYDETLISRKTPTNYLDLYVSHLLNGAASSSSSIFCDYGNKNLNTDLKLGDDQDFSEGKREMDLIEMVCSKSYNFY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0715 468 Pfam Myb-like DNA-binding domain 148 205 - -
Lan16g0715 468 ProSiteProfiles Myb-like domain profile. 192 242 IPR001005 -
Lan16g0715 468 PANTHER MYB DOMAIN PROTEIN 64-RELATED 134 360 - -
Lan16g0715 468 Gene3D - 144 196 - -
Lan16g0715 468 Gene3D - 199 265 - -
Lan16g0715 468 CDD SANT 199 242 IPR001005 -
Lan16g0715 468 ProSiteProfiles Myb-like domain profile. 145 191 IPR001005 -
Lan16g0715 468 PANTHER MYB PROTEIN-RELATED 134 360 - -
Lan16g0715 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 246 IPR017930 -
Lan16g0715 468 CDD SANT 148 191 IPR001005 -
Lan16g0715 468 MobiDBLite consensus disorder prediction 256 272 - -
Lan16g0715 468 SMART sant 144 193 IPR001005 -
Lan16g0715 468 SMART sant 196 244 IPR001005 -
Lan16g0715 468 MobiDBLite consensus disorder prediction 233 272 - -
Lan16g0715 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 195 IPR017930 -
Lan16g0715 468 MobiDBLite consensus disorder prediction 241 255 - -
Lan16g0715 468 SUPERFAMILY Homeodomain-like 143 238 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0715 Lan-Chr16 10461878 10464881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0715 32 460 MYB Transcription Factor Family AT5G58850 38.530 4.02e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan16g0715 Myb_DNA-bind_6 3.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0715 K09422 - gmx:100786295 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0715 16 10461878 10464881 Lan11g0392 11 2863714 2867276 PCT