Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0705 ATGGAAGAGGAAAAGAAGGGAGTGGAAGAAGTAAGATACCGTGGTGTGAGGGTAAGGCCATGGGGTAAGTATGGTGCAGAGATAAGGGACCCAACAAAAGCAAAAGGAAGACAATGGTTAGGGACATTTGATACAGCAAAAGAAGCTGCTAGAGCTTATGACCGTGCTGCTATTGCTTTAAGGGGTGCTCTTGCAGTTCTTAATTTTCCTGATGAGTATTATTCTCATCTTCCTTTTGTATCATCAATATTTGGTTCTTGTTCTGATGATAATAATGGCATTGAAAGTTCTTATTCTGGTAATGGAGAATGTAGGGAAGTTATTGAGTTTGAGTGTTTAGATGATAAGGTGTTGGAAGATCTTCTTGAACAAGAGGTGAAGAAAATGAGTGAAGAATAA 399 0.3885 MEEEKKGVEEVRYRGVRVRPWGKYGAEIRDPTKAKGRQWLGTFDTAKEAARAYDRAAIALRGALAVLNFPDEYYSHLPFVSSIFGSCSDDNNGIESSYSGNGECREVIEFECLDDKVLEDLLEQEVKKMSEE* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0705 132 Pfam AP2 domain 12 62 IPR001471 GO:0003700|GO:0006355
Lan16g0705 132 PANTHER ETHYLENE RESPONSE FACTOR 3 127 - -
Lan16g0705 132 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Lan16g0705 132 PRINTS Ethylene responsive element binding protein signature 52 72 IPR001471 GO:0003700|GO:0006355
Lan16g0705 132 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Lan16g0705 132 PANTHER DNA-BINDING DOMAIN 3 127 IPR044808 GO:0003700|GO:0009873
Lan16g0705 132 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Lan16g0705 132 SUPERFAMILY DNA-binding domain 12 72 IPR016177 GO:0003677
Lan16g0705 132 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Lan16g0705 132 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0705 Lan-Chr16 9770570 9771121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0705 9 128 AP2-EREBP Transcription Factor Family AT3G23230 55.285 1.06e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan16g0705 AP2 2.8e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0705 - - gmx:100796977 170.244