Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0697 ATGGCCACCGCCGCTGCCACGTCATACTTCTTCGGCACCCGTCTCAATAATCCAGCCTCACATTCCGGAAAGTTCCACGCCTTCTTCAACCTTCGTATAAAAAAGTCACCACCTGCACCCAAGAAAAAGGAGAAGGTCAAACCGAGTTCCGATGGACTAGTGTGGTTCCCTGGTGCTCAATCACCGGAGTGGCTTGATGGATCATTGGTCGGTGATCGCGGTTTCGACCCATTGGGGTTCGCGAAACCTGCAGAGTATTTGCAGTTTGATCTTGACTCTTTGGACCAGAACCTCGCGAAAAACCTCGCTGGTGATATCATCGGAACCAGGTCGGAGACAACGGAGGTGAAACCGACGCCATTTCAGCCTTACACGGAGGTTTTTGGGTTGCAGAGGTTCCGTGAGTGTGAGCTCATTCATGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCTCTTGCTGTTGAAGCCTTCACTGGTGTTGCATGGCAAGACGCTGGAAAGGTAGAGCTGGTGGAAGGGTCATCCTACTTTGGACTTCCTCTTCCATTCTCAATTACATCATTGATCTGGATTGAGGTATTAGTGATAGGATATATTGAATTCCAAAGAAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCTGGTGGCAAGTTCTTTGATCCATTGGGATTGGCCAAGGACCCTGAAGAAAAAGAAAGACTTCAACTTGCAGAGATCAAACATTCACGCTTAGCTATGGTGGTCTTTCTCACCTTTGCAATTCAAGCAGCTATAACTGGAAAAGGCCCTATCAGTTTTATTGCTACCTTCAACAAGTGA 822 0.4818 MATAAATSYFFGTRLNNPASHSGKFHAFFNLRIKKSPPAPKKKEKVKPSSDGLVWFPGAQSPEWLDGSLVGDRGFDPLGFAKPAEYLQFDLDSLDQNLAKNLAGDIIGTRSETTEVKPTPFQPYTEVFGLQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGLPLPFSITSLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAKDPEEKERLQLAEIKHSRLAMVVFLTFAIQAAITGKGPISFIATFNK* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0697 273 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 2 273 - -
Lan16g0697 273 Pfam Chlorophyll A-B binding protein 62 257 IPR022796 -
Lan16g0697 273 Gene3D Chlorophyll a/b binding protein domain 52 273 - -
Lan16g0697 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 273 IPR001344 GO:0009765|GO:0016020
Lan16g0697 273 SUPERFAMILY Chlorophyll a-b binding protein 51 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0697 Lan-Chr16 9403075 9406102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0697 10 270 Chloroplast and Mitochondria Gene Families AT3G08940 72.137 9.42e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0697 K08915 - gmx:100820335 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0141 4 2253543 2256600 Lan16g0697 16 9403075 9406102 LSH