Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0672 ATGATGTTCAAATCTCACTCCTACAAGCCCTTCCTTCTCCACCTCAATGGTATCATCTCTCTCAAGTTCTCAACAAAAACTTCACAATCACACTCTTTCATTGTCTCCTACCTCATCAACAATCTCGGGTTCTCTTCAGAAACTGCTCTCAAAGCTTCAAAACGACTTCGTTTCAATACCTCACAGAAACCGGATTCAGTTCTTGCTTTCTTCAAAAGCCATGGATTTTCTGATTCTCAGGTCAGTAGCATTATTACAAAGACACCCCATTTGCTTTCGAGCGATCCCCATAAAAATTTTATGCCAAAGTTTGAATTTTTTGCCTCAAAAGGTGCTTCCTCTTCTGAAATTGTGCTTGCTGTTACTAAGAACCATAGTTTACTACTATCAAGCCTTGAGAATAACATAATCCCTATGTATGGCTTGATAAGAAGATTTTTTGAATCTGATGAGAAAGCACTTCATTATTTCCTCAACTGGCCTGATTTATTACAAAAGAAGAATCATGTGAAGCAGAATTTGGAATTGTTGTTTGATGAAGGAGTGAAAGACTCAAACTTTTACTTTATTGGTATGAAAGCTTGTGTATTTCATTCTGATGAATTGAGGAAAGCTGTGGATGAAGTAAAGGAATTGGGGTTTGATCCTTCGACATCGAGTTTTCTTGCAGCGTTGGCAGCCAAAGCGACCGTGCCCAAAGCGAAATGGGATGAAAAAGTTGATGCCTTTAAGAGCTGGGGGTGGTCTGAAGAAACAATTGCTGCTGCATTCAAGAGGCATCCGCGGTGTATGTTGACATCTAAGGAGAAAATTAATGCAGTCATCAGGTTTTGGGTCAATCAGCTTGGATGGAATTCTTCGTACCTTGCCATGTTTCCAGTTGTTTTTGGATATAGTTTGGAGAAAAGGATCATTCCCAGGGCTTCCGTGGTTCAGTATCTACTCAGTCAAGGTTTGATAAAGAAGAATGCCAGCTTATATACACCTTTTGTATTGTCCGAAGAGATTTTCCTTGAAAAGTATGTGAAAGCTTTCAATGCGGAAAGTTTTCAGCTTCTAAAGCTATACAAAGGAGGATAA 1080 0.3926 MMFKSHSYKPFLLHLNGIISLKFSTKTSQSHSFIVSYLINNLGFSSETALKASKRLRFNTSQKPDSVLAFFKSHGFSDSQVSSIITKTPHLLSSDPHKNFMPKFEFFASKGASSSEIVLAVTKNHSLLLSSLENNIIPMYGLIRRFFESDEKALHYFLNWPDLLQKKNHVKQNLELLFDEGVKDSNFYFIGMKACVFHSDELRKAVDEVKELGFDPSTSSFLAALAAKATVPKAKWDEKVDAFKSWGWSEETIAAAFKRHPRCMLTSKEKINAVIRFWVNQLGWNSSYLAMFPVVFGYSLEKRIIPRASVVQYLLSQGLIKKNASLYTPFVLSEEIFLEKYVKAFNAESFQLLKLYKGG* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0672 359 Gene3D Transcription termination factor 3, mitochondrial 192 353 IPR038538 -
Lan16g0672 359 Gene3D Transcription termination factor 3, mitochondrial 31 191 IPR038538 -
Lan16g0672 359 SMART mt_12 82 113 IPR003690 GO:0003690|GO:0006355
Lan16g0672 359 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Lan16g0672 359 SMART mt_12 118 150 IPR003690 GO:0003690|GO:0006355
Lan16g0672 359 SMART mt_12 286 320 IPR003690 GO:0003690|GO:0006355
Lan16g0672 359 SMART mt_12 187 215 IPR003690 GO:0003690|GO:0006355
Lan16g0672 359 Pfam mTERF 68 185 IPR003690 GO:0003690|GO:0006355
Lan16g0672 359 Pfam mTERF 234 337 IPR003690 GO:0003690|GO:0006355
Lan16g0672 359 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 358 - -
Lan16g0672 359 PANTHER CGI-12 PROTEIN-RELATED 21 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0672 Lan-Chr16 8868941 8878843 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan16g0672 mTERF 3.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0672 K15032 - gmx:102666739 344.739