Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0671 ATGTTCAAATCCCTTCTCCATCTCAAAACTATAATCTCTACCACATTCCAAACCACTTCACATATATCTCTTCATTCCTCATTTTCTCTTCAATTCTTCACAACCAATTCCACTACAAAACTTCCTAAACGACCCCGTTTCAGCACCTCACAGGACCCAGATCCATTTCTCGCATTCTTCAGAAGCCATGGTTTTTCAGTTTCTCAGGTCAATAGTATTCTCACAAAGTCACCACGGTTGATTTCATGCAATACCCATGAACTTTTTTTGCCAAAGTTTGAATTTTTAGCCTCCAAAGGTGCTTCCAAATCTGACATTGTTCTTGCAGTTACTAAGAACCCTAATTTCCTACGTTCAAGCATAGAGGATAAGATAATCCCTATATATGAATTGATGAGGAGATTCTTTAAATCTGATAAGGAAGCCCTTAATTATTTCATTACTTGGCCTGCTTTATTGAAGAATAAGAGGGTTGTGGAGCAAGTTTTCAAAATTTTGTGTGATGAAGGAGTGAAGCATTCACACATTGCTTATTTGATTCGTATGAGATCTTGTGTGCTTCGTTCTGGCGAATTGAGGAAAGCTGTGGATGAAGTAAAGGAATTAGGATTCAATCCCTCGAAATCTGATTTCGTTACAGCATTGGCAGCCAAAGTGAGTGTGTCCAAAACCAAATGGAATGAAAAAGTTGATGCCTTTAAGAGCTGGGGTTGGTCCGAAGAAACAATTGCTGCCGCGTTCAAGAGGCATCCCCGTTGTATGCTGGCATCGAAGGATAAAATTAACGCGATCATGAGCTTTTGGGTCAATCAGTTAGGTTGGAATTCATTGGAGATTGCCATGTTTCCAGCTATTCTTGGATATAGTTTGGAGAAAAGGATCATTCCGAGGACTTCCGTGGTGCAGTGTCTACTCACATTAGGTTTGAGAAAGAATAATGCCAGCTTATATTCACCTTTTGTCATGTCTGAAAAGTTGTTCCTTGAGAAGTATGTAAACAAATTTGAGAAGGAAAGTTTTCAGCTTTTAAAGGTATACCATGGAGAAAGAAAAAATTGA 1059 0.3881 MFKSLLHLKTIISTTFQTTSHISLHSSFSLQFFTTNSTTKLPKRPRFSTSQDPDPFLAFFRSHGFSVSQVNSILTKSPRLISCNTHELFLPKFEFLASKGASKSDIVLAVTKNPNFLRSSIEDKIIPIYELMRRFFKSDKEALNYFITWPALLKNKRVVEQVFKILCDEGVKHSHIAYLIRMRSCVLRSGELRKAVDEVKELGFNPSKSDFVTALAAKVSVSKTKWNEKVDAFKSWGWSEETIAAAFKRHPRCMLASKDKINAIMSFWVNQLGWNSLEIAMFPAILGYSLEKRIIPRTSVVQCLLTLGLRKNNASLYSPFVMSEKLFLEKYVNKFEKESFQLLKVYHGERKN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0671 352 Gene3D Transcription termination factor 3, mitochondrial 138 344 IPR038538 -
Lan16g0671 352 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 33 348 - -
Lan16g0671 352 PANTHER CGI-12 PROTEIN-RELATED 33 348 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 Pfam mTERF 57 214 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 Pfam mTERF 212 327 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 SMART mt_12 71 102 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 SMART mt_12 276 310 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Lan16g0671 352 SMART mt_12 177 205 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0671 Lan-Chr16 8859022 8860350 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan16g0671 mTERF 9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0671 K15032 - gmx:102667698 313.538