Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0661 ATGAAATCCACCGGATTGGAAGAAAGGATGTGCGATTTCAAACCCTTCTCCGAATCAACGCAACCGGGATCCTCCTCATCTCGCTCCATCAGCGAAACCATCAATGGGTCTCATCAATTCACCATAAAGGGTTACTCTTTGGCCAAAGGAATGGGTTCTGGGAAGTACATAATGAGCGATACGTTCGGCGTTGGTGGTTACGATTGGGCAATTTACTTTTACCCTGATGGGAAGAATCCAGAGGATAATTCATTGTATGTGTCTGTGTTCATTGCGCTGGCGAGTGAAGGAACGGATGTTAGGGCACTTTTTAAGTTGACGCTTGTTGATCAGAGTCATAAGGGGAATGATAAAGTGCATAGCCATTTCGATCGGCCACTTGAGAGTGGACCTTATACTTTGAAGTATAGGGGCAGCATGTGGGGTTACAAGCGTTTTTTCAGAAGGTCACTTTTGGAGACTTCTGAGTATCTGAAGAATGATTGCCTTCTCATGCATTGCACTGTTGGCGTTGTCAAGACTCGATTTGAGGGATCTAAACAGGGTATTTTTGTGCCACAGTCGAACATGGGCCAGGATTTTAAGGACTTGTTAGAATCTGAAGTTGGCTGTGACATAGTCTTCAAGGTCAACAGCGAAACTTTCAAAGCTCATAAACTGATACTTGCTGCACGATCTCCTGTGTTTAGAGCTCAGTTTTTTGGACTTGTTGGGGATCCTAGCATAGATGAAGTGGTGGTGGAGGATATTGAGCCTTTTATCTTCAAGGCAATGCTTCTCTTCATATACTCAGACAAGCTTCCTGACATATATGATGTTATGGGCTCAGTACAGATTTGCTCATATACTGTCATGGTGCAGCATCTCGTGGCTGCTGCTGATCTCTATAATCTTGATCGGCTAAAAATGTTATGCGAATCAAAATTGTGTGATGAAATCAATGCTGACACTGTGGCCACCACACTTGCCCTGGCTGAGCAACACCACTGTCCACAGCTTAAGGCAATCTGCTTAAAATTTATTGCAAATTCAACAAACTTGGGAGTGGTAATGCAGTCTGAAGCTTTTATGCATTTGAAAGAGAGCTGTCCCTCAATGTTGTTGGAATTGCTGGAGACATTTGCATCAGCGGATGACAACTCAAGCCAGCCGTTCAGCAGGAAGAGAAGTAGCAGTAGCGTAAACGGTCAAGATTTAGCAGATGGTGCAGTAACCGAATCAGTCAATCCAAATGGTAGGCGTCTTAGGAGGCGGACATAA 1260 0.4421 MKSTGLEERMCDFKPFSESTQPGSSSSRSISETINGSHQFTIKGYSLAKGMGSGKYIMSDTFGVGGYDWAIYFYPDGKNPEDNSLYVSVFIALASEGTDVRALFKLTLVDQSHKGNDKVHSHFDRPLESGPYTLKYRGSMWGYKRFFRRSLLETSEYLKNDCLLMHCTVGVVKTRFEGSKQGIFVPQSNMGQDFKDLLESEVGCDIVFKVNSETFKAHKLILAARSPVFRAQFFGLVGDPSIDEVVVEDIEPFIFKAMLLFIYSDKLPDIYDVMGSVQICSYTVMVQHLVAAADLYNLDRLKMLCESKLCDEINADTVATTLALAEQHHCPQLKAICLKFIANSTNLGVVMQSEAFMHLKESCPSMLLELLETFASADDNSSQPFSRKRSSSSVNGQDLADGAVTESVNPNGRRLRRRT* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0661 419 ProSiteProfiles MATH/TRAF domain profile. 35 169 IPR002083 GO:0005515
Lan16g0661 419 MobiDBLite consensus disorder prediction 378 404 - -
Lan16g0661 419 CDD BACK_AtBPM-like 310 373 IPR034090 -
Lan16g0661 419 CDD BTB_POZ_BPM_plant 190 310 - -
Lan16g0661 419 Pfam BTB/POZ domain 194 311 IPR000210 GO:0005515
Lan16g0661 419 SUPERFAMILY TRAF domain-like 32 171 - -
Lan16g0661 419 SMART BTB_4 204 313 IPR000210 GO:0005515
Lan16g0661 419 MobiDBLite consensus disorder prediction 378 419 - -
Lan16g0661 419 Gene3D - 312 393 - -
Lan16g0661 419 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 23 384 IPR045005 GO:0016567
Lan16g0661 419 ProSiteProfiles BTB domain profile. 204 267 IPR000210 GO:0005515
Lan16g0661 419 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 34 174 IPR008974 GO:0005515
Lan16g0661 419 SUPERFAMILY POZ domain 185 311 IPR011333 -
Lan16g0661 419 Gene3D Potassium Channel Kv1.1; Chain A 180 308 IPR011333 -
Lan16g0661 419 CDD MATH 36 169 IPR002083 GO:0005515
Lan16g0661 419 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 23 384 - -
Lan16g0661 419 SMART math_3 40 152 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0661 Lan-Chr16 8687828 8694320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0661 K10523 - gmx:100786636 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0175 4 2849131 2855402 Lan16g0661 16 8687828 8694320 LSH