Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0637 ATGGGTTGTTGTTTTAGTGCAATAAAGATCAAAGCTGAAAGCCCTCCACACAATGGTTTGAATTCAAAGGATGGTAGTAGAGAAGATGGTGGTTTAAGCAGCAAGGTCTCCAGTAGTTCTATGCTTCTAGCTCCTAGGACCGAGGATGACATCTTGCAGTCAAGCAATTTGAAGAATTTCACATTCAATGAGCTAAAAACTGCTACAAGGAACTTTCGTCCAGATAGTTTGGTTGGTGAAGGTGGTTTTGGTTCTGTATTTAAGGGCTGGGTCGATGAGCAAACACTTGCCCCGACAAAACCGGGGACTGGATTTGTCGTTGCAGTGAAGAGGCTCAACCAAGAAAGCTCTCAAGGACACAGTGAATGGCTGACAGAAATAAACTACCTGGGGCAGCTGCATCATCCTAATCTTGTGAAACTGATTGGTTACTCCTTAGAAGATGACCACCAGATTTTGGTATATGAATTTTTGGCCAAGGGAAGTTTAGATAACCATTTGTTTAGGAGGGCTTCTTACTTTCAACCACTTTCTTGGAACATACGTATGAAGATCGTTCTTGATGCTGCAAAGGGTCTTGCATTTCTTCACAGTGATGAAGTTGATGTTATATATCGAGACTTCAAAACTTCTAATGTCTTGCTTGATTCAAATTACAATGCAAAACTCTCTGATTTTGGATTGGCAAAGGATGGACCAGAAGGTGATAAGAGTCATGTCTCTACAAGGGTAATAGGCACCTATGGCTACGCTGCTCCTGAATATATATCCACAGGTCACTTAACCAAAAAGAGTGATGTATACAGTTTCGGAGTAGTTATCCTGGAAATTATGTCAGGCAAACGTGTAGTGGATAATAACAGGCCATCAGGGGAGCATAACTTAGTTGAATGGGCCAAGCCATACCTCACTAGCAAACGCAAGATCTTCCAAGTCATGGATGCTCGAATCGAAGGCCAATACTCGTTGCGCGAAGCAATGACATTAGCGCACCTTGCAATTCAATGTTTGTCCGTAGAGTCCAAATTCCGACCAAAAATGGACGCGGTGGTGAGATTCTTGGAGCAACTTCAGAATTCCAGAGACATAGGTGAAGTGGAAGGAAGCTCTAGAGTTGAAACCAATGATCATAGCTCAAGCAGTAGTGGAACAAAACAACATAGAACAAGATTCAATGGAGAAGGTACTTCTACTCCAACACCATCTGCTTCTCCTCTTCATACATAG 1227 0.4238 MGCCFSAIKIKAESPPHNGLNSKDGSREDGGLSSKVSSSSMLLAPRTEDDILQSSNLKNFTFNELKTATRNFRPDSLVGEGGFGSVFKGWVDEQTLAPTKPGTGFVVAVKRLNQESSQGHSEWLTEINYLGQLHHPNLVKLIGYSLEDDHQILVYEFLAKGSLDNHLFRRASYFQPLSWNIRMKIVLDAAKGLAFLHSDEVDVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPEGDKSHVSTRVIGTYGYAAPEYISTGHLTKKSDVYSFGVVILEIMSGKRVVDNNRPSGEHNLVEWAKPYLTSKRKIFQVMDARIEGQYSLREAMTLAHLAIQCLSVESKFRPKMDAVVRFLEQLQNSRDIGEVEGSSRVETNDHSSSSSGTKQHRTRFNGEGTSTPTPSASPLHT* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0637 408 MobiDBLite consensus disorder prediction 15 40 - -
Lan16g0637 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Lan16g0637 408 SUPERFAMILY Protein kinase-like (PK-like) 56 361 IPR011009 -
Lan16g0637 408 Gene3D Transferase(Phosphotransferase) domain 1 158 380 - -
Lan16g0637 408 PANTHER OS01G0588500 PROTEIN-RELATED 22 392 - -
Lan16g0637 408 PANTHER KINASE 1B 22 392 - -
Lan16g0637 408 MobiDBLite consensus disorder prediction 364 408 - -
Lan16g0637 408 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0637 408 Pfam Protein tyrosine and serine/threonine kinase 77 354 IPR001245 GO:0004672|GO:0006468
Lan16g0637 408 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Lan16g0637 408 CDD STKc_IRAK 78 357 - -
Lan16g0637 408 MobiDBLite consensus disorder prediction 373 408 - -
Lan16g0637 408 Gene3D Phosphorylase Kinase; domain 1 43 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0637 Lan-Chr16 8162008 8166178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0637 58 362 Glycoside Hydrolase AT3G07070 48.208 7.10e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan16g0637 PK_Tyr_Ser-Thr 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0637 - - gmx:100775335 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0637 16 8162008 8166178 Lan2g1091 2 22164317 22167696 PCT
Lan16g0637 16 8162008 8166178 Lan9g1287 9 20048562 20051626 PCT
Lan2g1091 2 22164317 22167696 Lan16g0637 16 8162008 8166178 PCT
Lan9g1287 9 20048562 20051626 Lan16g0637 16 8162008 8166178 PCT