Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0630 ATGGCACTGGCCAAAGACAGAACCCTACATGATTCAAGCATGGGAAGCAAGGTTCAAACTTGTGTTTTCAATGACACTGCTATGGAGATTACTTCATTGTCACTTCATGGGGTCAATAAGCACAACCACAAGTTTGTGCTTGAAGAGGAAGATGGCTCAAAAAACACTAATGGGCTTAGCAATGATTCAGCTATAACTCATTCTCCTCCACTTTGTGGAAGTGGCATTGGTTATGTTTATAAGGGCACAAACACAAACTATCAGATTCAAGAAGCAGAATCTGTAATAAATTTCAAAGACAACAATCTCATGCAACCCAATGAATCTTTGCTTAGCTTTCAGCAAAGCAGGCTTATCCATAACAACAGTTACCTCAAAGATAACATTGAGAATGAGTACTACTGTGGTTGGGAGAATAATTTGCATAATCAGATTAGTCCTAGAAACACTGAAGACTTGCGCCTGGTGCAAGATTTCAATTGCTTTCAAACTGCTACTAGTGGCTATAGTTCCATAATCAATAGTGCAAAAGAGAATCAACATGGTGAAAGTTCATTTGGTTGGCTCTATCCTGAACCAACTACCCTTGCTGAGAGTCTCCAAGAGCCAGGAGCACAAGAACAAGTCATGAAAAAACGCCCTTCAATGGGAGAGAACATGAAAGCTGCCAAGAAACAATGCCCAACTGAGAGTAAAACTCCAAAACCTAAGTCAAGTCCATCCAATGACCCTCAAAGTGTGGCTGCCAAGAATAGAAGAGAGAGGATAAGCGAGAGGATGAAGATCTTACAAGATCTAGTGCCTAATGGCTCCAAGGTTGATTTGGTTACCATGCTGGAGAAAGCAATTAGTTATGTGAAGTTTCTTCAATTGCAAGTGAAGGTGTTGGCAACTGATGAATTTTGGCCTGTTCAAGGTGGAAAAGCTCCTGATATTTCTCAAGTAAAAGAAGCCATTGATGCTATTCTTTCATCCCAAAGAGAAGGAAGTTCAACTTCAAAGTAG 1005 0.404 MALAKDRTLHDSSMGSKVQTCVFNDTAMEITSLSLHGVNKHNHKFVLEEEDGSKNTNGLSNDSAITHSPPLCGSGIGYVYKGTNTNYQIQEAESVINFKDNNLMQPNESLLSFQQSRLIHNNSYLKDNIENEYYCGWENNLHNQISPRNTEDLRLVQDFNCFQTATSGYSSIINSAKENQHGESSFGWLYPEPTTLAESLQEPGAQEQVMKKRPSMGENMKAAKKQCPTESKTPKPKSSPSNDPQSVAAKNRRERISERMKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKEAIDAILSSQREGSSTSK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0630 334 Pfam Helix-loop-helix DNA-binding domain 250 290 IPR011598 GO:0046983
Lan16g0630 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 240 289 IPR011598 GO:0046983
Lan16g0630 334 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 325 - -
Lan16g0630 334 SMART finulus 246 295 IPR011598 GO:0046983
Lan16g0630 334 CDD bHLH_AtIND_like 241 303 - -
Lan16g0630 334 MobiDBLite consensus disorder prediction 200 253 - -
Lan16g0630 334 MobiDBLite consensus disorder prediction 232 247 - -
Lan16g0630 334 Gene3D - 243 301 IPR036638 GO:0046983
Lan16g0630 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 244 299 IPR036638 GO:0046983
Lan16g0630 334 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0630 Lan-Chr16 8018184 8020002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0630 134 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 55.172 1.08e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan16g0630 HLH 4.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0630 - - lang:109345122 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0193 4 3233161 3234951 Lan16g0630 16 8018184 8020002 LSH