Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0628 ATGATCTGGGATTTTGGTTTTGCATGTGTTGCAAACCCAAAGAGAGCAAAAAAGAGCTCAGAGAGAAGCCATAATGACAAAAAGATTGCAACTTTGGAGCACAATAAGGCTTGGTTGCTTGCTGAGTCTGGTGGGTGTGGAAGACCAGAACTCACAAATGCTGACCCTCAATCTGTTCACTCATCTTTCAGGTTCAGTTTTTGTTCTCAGGTTGAGTTGGAATCATTGAATATGAGTTCTTCCAATGCTGCAACTGTTTTGATGGTGAACTTGGATAATGGGGTTAGTGAGTCTCTTGCTAGGGAAATGAAATGGAGGAGGATTGAGTCATTGGAGAGAAGCATATCCCCTGTGGCACACTCCTTGATAAGGTTCAGCTATGGTGAAATTCTGTCTGCTACGCATAATTTCTCTGAAGGTAGAGTATTGGGAAGAGGAGCATTGAGCTGTGTTTTTAGGGGAAGGGTTGGGATTTTAAGGACTGCTGTTGCGATTAAACGGTTGGACAAGGAAGACAAGGAGTCTTCAAAGGCCTTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGCCCCAATGTTGTTCCCCTTGTTGGTTTTTGTATTGATCCAGAGGAGGGTTTGTTCTTGGTGTACAAGTATGTCTCCAGTGGCAGCTTGGAGTGTCACTTGCATGGGAGGAAGAAGGGTGTCAAGGGTAGTTCACCGCTTCCGTGGTCTGTGAGGTATAAAGTTGCACTTGGAATTGCAGAAGCCATGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCACCGAGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAAGAAGACTCCCAAGCTATGTGATTTCGGATTAGCTACATGGACTTCTGCGCCTTCTGTTCCATTCCTCTGCAAAACTGTCAAGGGAACATTTGGATACTTGGCTCCCGAGTATTTCCAACACGGGAAAGTATCAGATAAGACTGATGTCTATGCTTTTGGAGTGGTTTTATTGGAACTCATAACCGGCCGGAAGCCAATTGAGACAAAAAGGCCTCCAGGAGAAGAGAACTTGGTCTTATGGGCTAAACCTTTTCTACAGAAAGGGAAAGGAGCCGTTGAAGAGTTGCTTGATCCCCAACTGAAGCACAGCTTAAGATTCTCAAATCAGATAGATCGATTGATCGAAGCAGCAGCTGCATGTGTATCAAATGAAGAATCTGGAAGACCTCGCATAAATGAGATTATTGCGATACTGAAAGGTGAAGAAGAACCTGTTTACTCTAAAAGAAATAAGTCCGGTTATCTTGGGAATGGATGTGTGGTTGATTGTTATTCTCAATTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTTCAGAGTTTGAGGATGATGATTATCTCTATAGTCGTTAA 1431 0.4263 MIWDFGFACVANPKRAKKSSERSHNDKKIATLEHNKAWLLAESGGCGRPELTNADPQSVHSSFRFSFCSQVELESLNMSSSNAATVLMVNLDNGVSESLAREMKWRRIESLERSISPVAHSLIRFSYGEILSATHNFSEGRVLGRGALSCVFRGRVGILRTAVAIKRLDKEDKESSKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSSGSLECHLHGRKKGVKGSSPLPWSVRYKVALGIAEAMAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIETKRPPGEENLVLWAKPFLQKGKGAVEELLDPQLKHSLRFSNQIDRLIEAAAACVSNEESGRPRINEIIAILKGEEEPVYSKRNKSGYLGNGCVVDCYSQLQQTNNEMKSHLALAMLGVSEFEDDDYLYSR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0628 476 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 1 475 - -
Lan16g0628 476 Gene3D Transferase(Phosphotransferase) domain 1 215 433 - -
Lan16g0628 476 SUPERFAMILY Protein kinase-like (PK-like) 124 420 IPR011009 -
Lan16g0628 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Lan16g0628 476 PANTHER OS01G0750732 PROTEIN 1 475 - -
Lan16g0628 476 Pfam Protein kinase domain 138 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0628 476 SMART serkin_6 137 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0628 476 ProSiteProfiles Protein kinase domain profile. 137 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0628 476 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0628 Lan-Chr16 7962501 7965780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0628 125 454 Trihelix Transcription Factor Family AT1G70460 40.774 1.47e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan16g0628 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0628 - - lang:109328985 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0195 4 3257815 3261234 Lan16g0628 16 7962501 7965780 LSH