Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0624 ATGGAAAACTTATTGGGTTTGCTTAGAATTCATGTTGATAAAGGTGTCAACCTTGCTATTAGAGATGTAAAGAGCAGTGACCCTTATGTGATTATCAAAATGGGCAAGCAGAAGCTGAAGACTCGGGTGGTGAACCAGAATATCAATCCTGTGTGGAATGATGAATTGACTTTGTCCATTACAGATCCTCATCTTCCAGTCCATCTATTTGTGTATGATAAAGACAAATTCAGCTTTGATGACAAAATGGGAGATGCAGAGTTTGATATTGCACCATTTCTTGAAGCAATTAAGATGCACTTGGAAGGCCTCCCAAATGATACTATAATCACAAAATTGCAGCCGAGCCGTGAAAATTGCCTAGCAGAAGAGAGCAAAATTGTGTGGAAAGATGGCAAAGTGGTGCAATATATGGTTCTTAGACTAAGAAATGTTGAGTCTGGTGAAGTGGAACTACAATTGCATTGGATTGATATTCCTGGTTCTAGGGGTCTTTAA 498 0.3896 MENLLGLLRIHVDKGVNLAIRDVKSSDPYVIIKMGKQKLKTRVVNQNINPVWNDELTLSITDPHLPVHLFVYDKDKFSFDDKMGDAEFDIAPFLEAIKMHLEGLPNDTIITKLQPSRENCLAEESKIVWKDGKVVQYMVLRLRNVESGEVELQLHWIDIPGSRGL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0624 165 CDD C2_ArfGAP 5 148 - -
Lan16g0624 165 Pfam C2 domain 6 92 IPR000008 -
Lan16g0624 165 SMART C2_3c 7 102 IPR000008 -
Lan16g0624 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Lan16g0624 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 148 IPR035892 -
Lan16g0624 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Lan16g0624 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lan16g0624 165 Gene3D C2 domain 4 160 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0624 Lan-Chr16 7940355 7942681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0624 38 165 C2H2 Transcription Factor Family AT1G70790 61.538 3.58e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0624 - - gmx:100306214 279.641