Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0620 ATGAAGAGGGATCACCAAGATACATGTGCTGGTTCTAGCTACGGTGGAGGAAGGAGTGGAAATAGTTATAGCAGCACCAAATCTGAATGTTCGTCAATGTCAAGTGGTAAGGCTAAGATGTGGGAAGATGAACAAAACCACGACGGCGGCCACGGCGGTGGAATGGATGAACTACTCGCAGCTTTGGGGTACAAAGTTCGTTCCTCCGACATGGCTGACGTGGCACAAAAACTAGAGCAATTAGAGATGGCTATGGGAATTACACAAGAGGATGTAATTTCACACCTTTCTTCTGACACTGTTCATTATGACCCAACCGATCTTTATTCATGGGTTCAAACCATGCTCACTGAAATCAACCCAGACACAACAAATAACGTCAACAATATCAACAACAACAACGACAACCTTAACTTTATCAACTCACGAATCGTCGACGATTCAGAATACGATCTGAGAGCGATTCCTGGCATAGCAGCTTACCCTATAAAAAGCGAGCCAAGTGAGAATAACGCAACAAAGAGACTGAAAAGTTCTCCAATTGAGTCAGATTCAAGTCCATTACCCCCAGTGACGGTTCCAGCTCCGGTATCACCCACGCGCTCTGTGGTTCTCGTCGATTCACAAGAAACCGGCGTGCGTCTAGTCCACGCGCTCATGGCTTGTGCTGAAGCTGTTCAGCAAGAAAATCTCAAGCTCGCCGACGCGCTTCTCAAGCACGTGAACCTTCTTGCTGCATCTCAAGCCGGAGCTATGAGAAAAGTTGCATCTTATTTCGCTCAAGCACTAGCTCATAAAATTTATCGAAGTTACCCTCAAGAGACTCTAGTAGATTCTTCTTTCTCCGATATGCTTCACATGCATTTCTATGAATCTTGCCCTTACCTCAAATTCGCACACTTCACTGCGAATCAAGCAATTCTCGAAGCTTTCTCTTCCGCCGCAGAAGTTCATGTCATCGATTTTGGACTCAAACAAGGGATGCAATGGCCAGCACTTATGCAAGCTCTCGCATGGCGACCTGGTGGGGCCCCCAGTTTCCGGTTAACCGGAATTGGTCCTCCTCAGAATGATAACGTAGACTCTCTTCAACAGGTGGGTGTGAAGCTCGCTCAATTGGCTCAAACAATTGGGGTGCGGTTCGTTTTCCGCGGTTTTGTATGTAATAGTCTGGCTGATCTTGACCAGACCATGCTCGATATCCGGGCCGAGGAAGCAGTTGCGGTGAACTCGGTATTCGAGCTTCACCTTATGCTTGCCCAACCGGGATCGATCGAGAAGGTTCTTGCCACTATTAAAATGATCAAGCCTAAGATCGTGACTATTGTTGAACAAGAAGCAAACCATAATGGACCGGTTTTTATGGACCGGTTCAATGAGGCCTTACATTACTATTCGAGTCTGTTTGACTCATTGGAAGGAACATCCGGTTCGTTACCTTCGAGTCAGGATGCATTGATGTCCGAGCTGTATTTGGGTAGACAGATTTGTAACGTGGTGGCTTCTGAAGGAGTGGACCGGGTCGAGAGGCACGAGACGCTGAACCAGTGGAGGGTGAGAATGGGTTCGACCGGGTTCGAACCGGTTCATCTCGGTTCAAACGCTTTTAAACAAGCGAGTATGTTGTTGGCTCTTTTTGCTGGTGGGGATGGGTATAGGGTGGAGGAAAATAATGGGTGCCTCATGCTTGGGTGGCATACGAGGCCACTCATTGCAACTTCGGCTTGGAAGCTTCATGCTACTGAATCGTAG 1752 0.4755 MKRDHQDTCAGSSYGGGRSGNSYSSTKSECSSMSSGKAKMWEDEQNHDGGHGGGMDELLAALGYKVRSSDMADVAQKLEQLEMAMGITQEDVISHLSSDTVHYDPTDLYSWVQTMLTEINPDTTNNVNNINNNNDNLNFINSRIVDDSEYDLRAIPGIAAYPIKSEPSENNATKRLKSSPIESDSSPLPPVTVPAPVSPTRSVVLVDSQETGVRLVHALMACAEAVQQENLKLADALLKHVNLLAASQAGAMRKVASYFAQALAHKIYRSYPQETLVDSSFSDMLHMHFYESCPYLKFAHFTANQAILEAFSSAAEVHVIDFGLKQGMQWPALMQALAWRPGGAPSFRLTGIGPPQNDNVDSLQQVGVKLAQLAQTIGVRFVFRGFVCNSLADLDQTMLDIRAEEAVAVNSVFELHLMLAQPGSIEKVLATIKMIKPKIVTIVEQEANHNGPVFMDRFNEALHYYSSLFDSLEGTSGSLPSSQDALMSELYLGRQICNVVASEGVDRVERHETLNQWRVRMGSTGFEPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLHATES* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0620 583 ProSiteProfiles GRAS family profile. 206 577 IPR005202 -
Lan16g0620 583 PANTHER DELLA PROTEIN RGL1 48 577 IPR030006 GO:0003712|GO:0005634
Lan16g0620 583 Gene3D - 54 119 IPR038088 -
Lan16g0620 583 SMART DELLA_2 56 129 - -
Lan16g0620 583 MobiDBLite consensus disorder prediction 12 39 - -
Lan16g0620 583 MobiDBLite consensus disorder prediction 166 186 - -
Lan16g0620 583 Pfam GRAS domain family 215 577 IPR005202 -
Lan16g0620 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 577 IPR005202 -
Lan16g0620 583 Pfam Transcriptional regulator DELLA protein N terminal 56 122 IPR021914 -
Lan16g0620 583 MobiDBLite consensus disorder prediction 164 194 - -
Lan16g0620 583 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0620 Lan-Chr16 7803249 7805402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0620 57 578 GRAS Transcription Factor Family AT3G03450 65.283 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan16g0620 GRAS 1.3e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0620 K14494 - gmx:547719 812.757