Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0612 ATGGCCCTCTCCCTCTCATTCCTCACCACCATTCTTCTCACTCTCTCCTCACTCCCTTCCCTCACTCTCTCCTCCTCCTCCTCCACTGACTCCTTCGTCTACATCGGTTGTACCCAACAACAATACACCCCAAACTCCGCTTATGAAACAAACATCAACTCTCTCCTCACCTCACTCACCAACTCAGCCACTTACTCTTCCTACAACCACTTCTCCATCGTGGGAGGTTCCACCTCCCACGATGTCGTCTACGGCCTCTACCAATGCCGAGGCGACCTCGCCATGCCAGACTGCGCCACCTGCATTGCCAAGGCGGTCACCCGTGTAGGTGACCTATGTCCGCAGGCCTGTGGTGGTGCAGTCCAGCTGGAAGGATGTTTCATAAAATATGACAATGCAACTTTCTTGGGGCAAGAGGACAAGACAGTGGTGCTTAAAAAGTGCGGGTCGTCGATGGGGGACAACATGGGTCAGAGGGACATGGTTTTGGCTGCATTGGCTGGTTCGGGTGGGGCATTCCGGGTTGGTGGGTCGGGTCAGGTGAAGGGAATGGCGCAGTGTAGTGGGGATTTGAGTTTTGGGCAGTGTCAGGATTGTGTAGGGGAAGCCATCAAACGGTTGAAAAGTGATTGTGGTGCAGCTGATTATGGGGACATGTTCTTGGCTAAGTGTTATGCTAGGTACTCTGCTAATGGGGCCCATGCTTACTCCAACAAATCCCACGGTAAATCAGGCAATGGAGGTGAAAAGAAATTTGCAATAATTATTGGATTATTAGCAGGTGTAGCTATACTTGTTATTTTCCTTCTCTTCTTGAGGAGGATTTGCGAAGGACAAGGTAAATAA 846 0.5071 MALSLSFLTTILLTLSSLPSLTLSSSSSTDSFVYIGCTQQQYTPNSAYETNINSLLTSLTNSATYSSYNHFSIVGGSTSHDVVYGLYQCRGDLAMPDCATCIAKAVTRVGDLCPQACGGAVQLEGCFIKYDNATFLGQEDKTVVLKKCGSSMGDNMGQRDMVLAALAGSGGAFRVGGSGQVKGMAQCSGDLSFGQCQDCVGEAIKRLKSDCGAADYGDMFLAKCYARYSANGAHAYSNKSHGKSGNGGEKKFAIIIGLLAGVAILVIFLLFLRRICEGQGK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0612 281 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Lan16g0612 281 ProSiteProfiles Gnk2-homologous domain profile. 136 233 IPR002902 -
Lan16g0612 281 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 277 - -
Lan16g0612 281 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Lan16g0612 281 Pfam Salt stress response/antifungal 177 230 IPR002902 -
Lan16g0612 281 Gene3D - 28 135 IPR038408 -
Lan16g0612 281 Gene3D - 149 231 IPR038408 -
Lan16g0612 281 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 6 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0612 Lan-Chr16 7567868 7570559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0612 5 229 Pollen Coat Proteome AT4G20670 25.498 5.18e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0612 - - mnt:21388510 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0203 4 3408831 3409401 Lan16g0612 16 7567868 7570559 LSH
Lan16g0612 16 7567868 7570559 Lan11g0311 11 2025648 2027891 PCT
Lan11g0311 11 2025648 2027891 Lan16g0612 16 7567868 7570559 PCT