Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0598 ATGCCCTTAGAGGGGATTTTCATTGAAACCACTTCAACTACACCTGATCTTTCCCTTCATATAAGCCCTCCAAGCACCACTTCTTCCTCTTCTTCTTTGATTTGTAACAACACCACAACTCAAGTAAGTGGTGGTGGCACCAATTATGAAGCACATAATTCATCCCAAGCCACTAATTTTTCTTCAAGAACTGTGCCTCAAGCTCATACTGAGCTCTCTCTTGGAAGAAATTTCTGTGGTGGAGGAACATCTCTTCAGGAAACACCACCACACCACCACCACAACAACAACAACCCTTATTATCAAAACCACCAATCTCATTTACAACACCTTCACCCTCAAGTATCTAACACTAGTAGCGGTGGTGCTACTACAACTACAACAAGTTCTACAAGGTTGAATAACATTAATTATGGGGTTTCCATGCTTGATGTGTCATCTGAAGGGTTGAGACCAATCAAGGGAATTCCAGTGTATCACAACCGTTCATTCCCTTTTCTCCCAGTAGAGCATACAAGAGACATGGATCATCATCATCCCAAGATGTGTTTATATCATCACATGCCTTCATATCCTTCTCTATCTTCTTCTTCTCCTTCCTCTTCTTCCCCTTCACCCTACTTGGCCACCGCGGCGCCCGGTTTGGATCCCATGTCCTTATTAAACTCCGGCACCCCCAACGGCCCCGCGGCGGCATATAGGGCTGCTGCAGCCACAATGTTTAATGGGATTTCCGGTGAGGCTTTCAAATCTCATCATCCATTGCACCACCACTCACACTATGGGGTTGGACCCTCTCATCATGAGGCTACTTCAGCAGGGCTGATGAGATCAAGGTTCTTGCCTAAATTACCAACAAAAAGGAGCATGAGAGCACCTAGAATGAGATGGACAAGCACCCTCCATGCTAGATTTGTTCATGCTGTTGAACTTCTTGGTGGCCATGAAAGAGCTACTCCAAAGTCAGTTCTGGAGCTCATGGATGTGAAGGATCTTACATTAGCTCATGTAAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTAACAAACCTCCTGCATCTTCAGGTCTTTCAGATGGATCTGGAGAGGATGACATGTCTCCTATCGGCAGCAGCGGTAGCGGCGGTCCACGTCAATTTCCGGACCAAAGAAGCCTACCGGATCGGCCAGTGCAACAAGACATGGACTACACTTCCACTACCACCACCACTCTATGGAGTAACTCTTCAAGTAGAGAGCCATGGCCTCCAAGTAGTGCTAATGACATAGGTGGTTTCAGACCACCAATCTTCCAGTCACAGCCATTATCAGGGGGACATCAAATTCAGGAATGTGATTCAACCCAACTCAAGAATAGTTTATCAGGGTCTAATTTAGAGTGCAAGAACCCAAGCTTGGAATTCACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1452 0.4573 MPLEGIFIETTSTTPDLSLHISPPSTTSSSSSLICNNTTTQVSGGGTNYEAHNSSQATNFSSRTVPQAHTELSLGRNFCGGGTSLQETPPHHHHNNNNPYYQNHQSHLQHLHPQVSNTSSGGATTTTTSSTRLNNINYGVSMLDVSSEGLRPIKGIPVYHNRSFPFLPVEHTRDMDHHHPKMCLYHHMPSYPSLSSSSPSSSSPSPYLATAAPGLDPMSLLNSGTPNGPAAAYRAAAATMFNGISGEAFKSHHPLHHHSHYGVGPSHHEATSAGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNKPPASSGLSDGSGEDDMSPIGSSGSGGPRQFPDQRSLPDRPVQQDMDYTSTTTTTLWSNSSSREPWPPSSANDIGGFRPPIFQSQPLSGGHQIQECDSTQLKNSLSGSNLECKNPSLEFTLGRPDWNGKGQA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0598 483 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 483 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lan16g0598 483 MobiDBLite consensus disorder prediction 345 442 - -
Lan16g0598 483 MobiDBLite consensus disorder prediction 15 39 - -
Lan16g0598 483 MobiDBLite consensus disorder prediction 80 108 - -
Lan16g0598 483 MobiDBLite consensus disorder prediction 367 381 - -
Lan16g0598 483 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 483 - -
Lan16g0598 483 Gene3D - 292 349 - -
Lan16g0598 483 SUPERFAMILY Homeodomain-like 290 346 IPR009057 -
Lan16g0598 483 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 293 346 IPR006447 GO:0003677
Lan16g0598 483 MobiDBLite consensus disorder prediction 394 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0598 Lan-Chr16 7358420 7368066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0598 1 480 G2-like Transcription Factor Family AT5G16560 39.062 7.87e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan16g0598 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0598 - - gmx:100813413 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0223 4 3654084 3659925 Lan16g0598 16 7358420 7368066 LSH
Lan16g0598 16 7358420 7368066 Lan11g0328 11 2351569 2355648 PCT
Lan16g0598 16 7358420 7368066 Lan9g1267 9 19926788 19931668 PCT
Lan11g0328 11 2351569 2355648 Lan16g0598 16 7358420 7368066 PCT
Lan9g1267 9 19926788 19931668 Lan16g0598 16 7358420 7368066 PCT