Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0593 ATGGCTCCAGTTTCATTGCCTCCTGGTTTTAGGTTTCACCCCACCGATGAAGAACTTGTTGCATATTACCTCAAAAGAAAGATCAATGGCCACAAGATTGACTTGGAGATCATCGCAGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCACTCTTACCTGGGAAAGATTTGGAGTGGTATTTCTTTAGCCCTCGAGATAGAAAGTACCCAAATGGATCAAGAACAAATCGTGCAACAAAATCTGGATATTGGAAGGCCACGGGGAAAGATCGAAAGGTGAATTCACAGCTTCGTGCAGTGGGAATGAAAAAAACCCTAGTTTACTATAGAGGCAGGGCACCACATGGAACTCGTACAGGTTGGGTTATGCATGAGTATCGTCTTGATGAGAGGGAATGTGAAATCGCTAATGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTCAAGAAGAGTTTAGTGATTACTCCAAAAGTTGAAGAGCACTATGTTAATGTCACCAACCATGTAAATAACCTAACACGTGATCAATCTTCAAACATGGAGCTATACTCTGAAGGAAGAGAAGAAGTTTTGGAGAGCTCAAATTATATGATGCCATGGGAAATGCGCCCAACCCAAAACATAGGTGGGACTTGGGTCAATAATATCAATGGTGGAACAAGGGATAATGGGAAATGGTCTCACTTCTCTTCAGAAGACCCATTACTCAATATTCCAACATCTTTATTTCCCAATTATGAAGCCTTACCTTATCATTCATCAAAGGTGAATATAGCACTAGAGTGTGCAAGAATGCAGCATAGGTTTTCAATGCCTCCATTGGAGGTGGAAGATTTCCCTCAAGCTGAAATTTCTGAGCTCAAGTTGACACAAGCGTCAAGTTCAATGTGTGAAAGCAGAAATGAAATAGATATCTTGCAAGAAATTCTTTCAGTTGCACAAGCTCAGGAATTGATGAATCATCAATCCAATAATTCACATGCATTGAGTGGCAATGAGAATTACTATGCACCATATGATCAAAATGATTTTACTTTTATGGTTGGCACTAATAACAATCACACAAATGATATGAACTACATGAAATATGTTAACCAAACATGGGAAGATCATAACACTAGATCAGTAGAGATTGGGGATTTTGATGATGAATTCAAGGGAGAGAGGCTGGTGGAGAACTTACGATGGGTTGGAATGACAAGCAAAAATATAGAGAAGAGCTTTATGGAAGATCAAAAGGTTGTTCCGATTCAGCATGTTTCAAGCATTCAAATAAACAAGGAAGAGAATGATCTGCGAGCAGAATCTGATCAACACAATTGCAACAAAGAATTCAATGACACTGACATCAACTATTTCTCATTAGGGTTCATCAATGATAATGACCCTAATGAGAACTTCATGGATGACAGTAACATTGATTATTCAAATTCTACCGGCTTTCAAGTTGTTGAGGAAACCAAAATGTTTGTTTCAAATGGTCCAGTAACTGAAACATTCTTTCACCACATAGTTCCTTCACAAACTGTCAAAGTTCAACTCAACCCTATAATGGCAAATAATCATTCTATAGAGAATGCTGAGACAAAGATGAAGTTGAAGAAAAAATGGGTTTTCTTTAGGAAATTCAAGGCAATGGGAAATGCCATTGTACTCATCTTTGAACTTATGCTTATGCATTGTCTTTATTTAAAGGAGCGAGTGGAAAATTTGGAGCTAGATCCTAAGGTTGTGAAAAAGAAATGCTGCAGTAATACAATGAAGATATTAATGAGACAACAAGCTGAAAATATCGAATGGAATGAGCAAGAAAATATTTGGTTTGTTGGTATCAAAAGTGGGAAAGGGTTTAGTGTGGTGTTGAAAAAGATAGGCATTTTTCTCACCATATCTTTTGCTTTATGTACCGTGTGGGTTAACCACATCATAGTTAATCCTTAA 1959 0.3823 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHKIDLEIIAEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQLRAVGMKKTLVYYRGRAPHGTRTGWVMHEYRLDERECEIANGLQDAYALCRVFKKSLVITPKVEEHYVNVTNHVNNLTRDQSSNMELYSEGREEVLESSNYMMPWEMRPTQNIGGTWVNNINGGTRDNGKWSHFSSEDPLLNIPTSLFPNYEALPYHSSKVNIALECARMQHRFSMPPLEVEDFPQAEISELKLTQASSSMCESRNEIDILQEILSVAQAQELMNHQSNNSHALSGNENYYAPYDQNDFTFMVGTNNNHTNDMNYMKYVNQTWEDHNTRSVEIGDFDDEFKGERLVENLRWVGMTSKNIEKSFMEDQKVVPIQHVSSIQINKEENDLRAESDQHNCNKEFNDTDINYFSLGFINDNDPNENFMDDSNIDYSNSTGFQVVEETKMFVSNGPVTETFFHHIVPSQTVKVQLNPIMANNHSIENAETKMKLKKKWVFFRKFKAMGNAIVLIFELMLMHCLYLKERVENLELDPKVVKKKCCSNTMKILMRQQAENIEWNEQENIWFVGIKSGKGFSVVLKKIGIFLTISFALCTVWVNHIIVNP* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0593 652 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Lan16g0593 652 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 363 - -
Lan16g0593 652 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Lan16g0593 652 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lan16g0593 652 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Lan16g0593 652 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0593 Lan-Chr16 7190279 7195013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0593 1 643 NAC Transcription Factor Family AT1G65910 42.879 2.33e-151 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan16g0593 NAM 5.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0593 - - gmx:100818019 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0230 4 3758423 3763254 Lan16g0593 16 7190279 7195013 LSH