Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0576 ATGGGTTCAACATCAGACTCATCTATCAAGGTTTTGAACAAGGAAGATGAAGAAGCATTGATTGGGCAAGTTGAAATATGGGAGCAAATGTGTAGCTTCACAGATTCTGTGGCACTGAAATCTGCTGTGGAATTGCGCATAGCTGATATAATAAACCGTTATGATCACCCAATACCCTTATCCAAAATTGTTAAGAACATTGAAAATGCACCCTCACCAGATATCTCATTGCTCCAAAGAATCATGAGAGTCTTGGTCAGGAGAAAGATCTTCAGTGCAGAGAAATCAGAGAGTAACGGAGAGACCCTTTTCGGTTTAACCCGCGCTTCGAAATGGATCCTACTTGATGGCACAAACATGACCTTAGCACCAATGTTGCTGCTAGAAAACCATCCATTGCATTTGAGTCCATGTCACTATGTTAGTGACATTATAAGAGAAGGCACAAAAAATGGCACTGCTTTTTTCAGATGCCATGGTCATGAACAATTTGAGATGACTGGTTTGGACCCTGAATATAACAAGTTGTTCAATGAGGGTATGGTTTGCACTGCAAGGATTGTGTCACAGGCTGTGATTTCTGGATACAAAGATGGGTTTAATAAGATTCAGACATTGGTTGATGTAGGAGGTGGAATTGGAGGATCACTTTCTGAGATTGTGAGAGCTTACCCTCATATCAAAGCTATTAACTTTGATTTGCCTCATGTGATTGCAACAGCACCTGAGTATGATGGAATTACTCATGTTGGTGGAGACATGTTTGTATCTATTCCTAATGCTGATGCTGTTTACATGAAGTGGATTCTACATGACTGGAGTGATGAACACTGCATCAAAATCCTGAAGAACTGTAGGAAAGCAATACCAGAGAAAACAGGAAAAGTGATAATTGTGGATCATATTCTTGAGCCAGAAGGGACTGAGTTATTCAGTAACACTGGTTTTGCTTTTGATATGATGCTACTTGCACATAATGCTGGTGGTAAAGAAAGGACTGAAGAGAATTGGAAGTGGCTATTTAAAGAAACAGGGTTCCCTCATTACAACATTATTAAGATCAAAGCTCTTCCATCAATCATTGAGGCTTTTCCAATATGA 1101 0.3969 MGSTSDSSIKVLNKEDEEALIGQVEIWEQMCSFTDSVALKSAVELRIADIINRYDHPIPLSKIVKNIENAPSPDISLLQRIMRVLVRRKIFSAEKSESNGETLFGLTRASKWILLDGTNMTLAPMLLLENHPLHLSPCHYVSDIIREGTKNGTAFFRCHGHEQFEMTGLDPEYNKLFNEGMVCTARIVSQAVISGYKDGFNKIQTLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVIATAPEYDGITHVGGDMFVSIPNADAVYMKWILHDWSDEHCIKILKNCRKAIPEKTGKVIIVDHILEPEGTELFSNTGFAFDMMLLAHNAGGKERTEENWKWLFKETGFPHYNIIKIKALPSIIEAFPI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0576 366 SUPERFAMILY "Winged helix" DNA-binding domain 17 114 IPR036390 -
Lan16g0576 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 365 IPR016461 GO:0008168
Lan16g0576 366 Pfam Dimerisation domain 38 86 IPR012967 GO:0046983
Lan16g0576 366 CDD AdoMet_MTases 205 303 - -
Lan16g0576 366 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 15 365 - -
Lan16g0576 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 363 IPR029063 -
Lan16g0576 366 Pfam O-methyltransferase domain 140 346 IPR001077 GO:0008171
Lan16g0576 366 PIRSF O-mtase 3 366 IPR016461 GO:0008168
Lan16g0576 366 Gene3D - 8 113 IPR036388 -
Lan16g0576 366 Gene3D Vaccinia Virus protein VP39 116 366 IPR029063 -
Lan16g0576 366 PANTHER O-METHYLTRANSFERASE 15 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0576 Lan-Chr16 6876391 6879244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0576 1 352 Monolignol Biosynthesis Gene Families AT5G54160 37.640 4.82e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0576 K22588 - gmx:100800801 620.928