Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0561 ATGTATCTGTCAAAAGGTTGCAAGCATGGAGCTTTTGTTTTCAGCTTGTGGTTCTGCTGCTATTTGCTACTGGCTGCAGGACAGGATGGCATCACGAAACCCACTGAAGTTGAAGCATTGAAAGCCATAAAGATAAGTTTGATTGATCCTAATAGAAATTTGAGCAATTGGGATCTCGGAGACCCATGCACAGCTAACTGGACAGGAGTTCTGTGCTTCAACGACACATTACTCGATGGCTATCTGCATGTTCAAGAACTGCAACTGCTAAAGTTGAACTTGTCAGGAACTCTGGCACCAGAGATTGGCAACTTAACTTATATGCAAAGACTGAACTTTATGTGGAACAACATAAGCGGGAGTATTCCGAAGGAGATAGGCAATATTAAAAGTTTGCAACTCTTGCTCCTGAATGGAAATCAATTAACAGGTCCTCTGCCAGAGGAGCTTGGTTATCTTCCAGTCCTCGACAGAATACAAATCGATCAGAACCACATAACAGGACCTTTACCTGTATCATTTGCAAATCTAAACAAGACAAAGCACTTTCACATGAATAATAATTCAATTAGCGGGCAAATCCCACCAGAGCTTTCCAGATTACCAAGCCTTGTTCATCTCCTTCTCGACAACAACAACTTATCAGGATATCTTCCCCCTGAGCTGTCCAATTTACCGAGCTTACTTATAGTTCAACTTGATAACAATAACTTTGGTGGAAATAGCATCCCAGATTCCTACCGCAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAATTGCAATTTGACAGGACCAATTCCTGATCTAAGCACAATACCACACCTTGGTTATCTTGACCTCAGTTCCAATCAGTTGAATGGATTGATTCCCCCTAACAAGCTTTCTGAAAACATCACAACCATTGATTTATCAAACAACAAGCTTACTGGAACTATTCCACCCTACTTTTCTGGTCTTCAGCATCTTCAGAAACTGTCACTTGCAAACAATTCATTGAATGGTAGTGTTCCTTCCACCATTTGGCAGAACAAGACATCAAATGGAACAGAAATATTTCTCGTGGAGTTTCAAAATAATAAACTTACAAGCATATCTGGCGATACTAATCTTCCTCCAAATGTCACTCTCGAGCTTAATGGTAATCCTCTGTGCTCAAATGACACCCTAAGTCAGTTCTGTGTATCAGAAGCTGCTTCCGGTGACCCAAATGGCTTAATTCCAGCAAACCCCAATGCTTCCTGTCCTACTCAAGCATGCCCCCCTCCTTATGAATACTCTGTAGATTGTTTCTGTGCAGCACCATTGCTTGTTGGTTATCGGTTGAAAAGTCCTGGATTTTCAGATTTTCGCCCATACAAGGAGACATTTGAGGACTATCTGAGTTCTGGTCTTGATATATCTACTGATCAGCTTCAGTTTACTTTTAGATGGCAAGTAGGACCTCGACTGAGCATGGAGTTGAAGCTTTTTCCCGTATATGTTGTCAATAGTAGCACTCATATTTTTAATGACAGTGAGCTCCTGCGGATCACAAGCATGTTCACAGGATGGAAAATTCCGGACAGTGACTTGTTTGGGCCTTATGAACTACTTAACTTCACTCTGCTAGATCCTTACAAGGATGTGATTTTCACCTCTTCAAAATCAGGGTCTGGGATAAGTAAGGGTGCACTGGCTGGCATAGTCTTAGGGGCAATTGCCTGTGCAGTGACATTATCTGCAATTGTTACTCTTCTCATATTAAGAGTAAAACTGAAAGATCATCGTGCAGTTTCCAAACGACGTCACTCTTCTAAGACCATAATAAAAATTGATGGTGTAAGGTCCTTCACTTATGAAGAAGTGTCCTCTGCAACACACAATTTTAGCAACTCTGCTCAAGTTGGACAAGGGGGCTATGGGAAGGTTTATAAAGGCGTTCTACAAAACGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGATCACTGCAAGGTGAGAAGGAGTTTCTTACAGAAATATCATTACTATCAAGGTTACATCATCGCAACCTTGTCTCTCTGCTCGGATACTGTGACGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGGACGCTAAGGGATCACCTTTCAGCTAAATCAAAAGAACCTCCGAATTTTGCCATCAGAATGAAGATAGCACTAGGGTCAGCTAAAGGTCTTGCGTATCTACACACTGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAATATATTACTGGACTCTAATTTCACTGCAAAAGTGGCTGATTTCGGACTTTCAAGGCTTGCCCCAGTACCAGACCTCGAAGGAGTTGTTCCTGGTCATGTATCAACGGTGGTAAAGGGGACCCCGGGTTACCTTGATCCGGAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTATAGTCTCGGTGTTGTATTTCTAGAACTTGTGACCGGGATGCATCCAATCTCACATGGCAAAAACATTGTTAGAGAGGTTAATGTTGCATACCAATCTGGTGAGATATTTTCTGTTATCGACGAACGGATAGGGTCTTATCCCTCTGAGCATTTAGAGAAATTTTTAACTTTGGCCCTCAAGTGCTGCGAAGACGACCCGGAATCACGGCCTAGAATGACAGAAGTGGTTAGAGAGCTTGAAAACATATGGTCCATGATGCCTGAATCAGATACCAAGAAAACTGAATCTGTAACTAGTGATTCCGGAAAATTATTCAGCACAACATCTTCATCTTCTACTACAAAAACTCCTTTTATATCCGGAGATGTATCAGGCAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG 2859 0.419 MYLSKGCKHGAFVFSLWFCCYLLLAAGQDGITKPTEVEALKAIKISLIDPNRNLSNWDLGDPCTANWTGVLCFNDTLLDGYLHVQELQLLKLNLSGTLAPEIGNLTYMQRLNFMWNNISGSIPKEIGNIKSLQLLLLNGNQLTGPLPEELGYLPVLDRIQIDQNHITGPLPVSFANLNKTKHFHMNNNSISGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSNLPSLLIVQLDNNNFGGNSIPDSYRNMSKLLKLSLRNCNLTGPIPDLSTIPHLGYLDLSSNQLNGLIPPNKLSENITTIDLSNNKLTGTIPPYFSGLQHLQKLSLANNSLNGSVPSTIWQNKTSNGTEIFLVEFQNNKLTSISGDTNLPPNVTLELNGNPLCSNDTLSQFCVSEAASGDPNGLIPANPNASCPTQACPPPYEYSVDCFCAAPLLVGYRLKSPGFSDFRPYKETFEDYLSSGLDISTDQLQFTFRWQVGPRLSMELKLFPVYVVNSSTHIFNDSELLRITSMFTGWKIPDSDLFGPYELLNFTLLDPYKDVIFTSSKSGSGISKGALAGIVLGAIACAVTLSAIVTLLILRVKLKDHRAVSKRRHSSKTIIKIDGVRSFTYEEVSSATHNFSNSAQVGQGGYGKVYKGVLQNGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLLGYCDEEGEQMLVYEFMPNGTLRDHLSAKSKEPPNFAIRMKIALGSAKGLAYLHTEADPPIFHRDVKASNILLDSNFTAKVADFGLSRLAPVPDLEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELVTGMHPISHGKNIVREVNVAYQSGEIFSVIDERIGSYPSEHLEKFLTLALKCCEDDPESRPRMTEVVRELENIWSMMPESDTKKTESVTSDSGKLFSTTSSSSTTKTPFISGDVSGSDLVSGVIPSIKPR* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0561 952 MobiDBLite consensus disorder prediction 901 952 - -
Lan16g0561 952 Gene3D Ribonuclease Inhibitor 189 294 IPR032675 -
Lan16g0561 952 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Lan16g0561 952 Gene3D Phosphorylase Kinase; domain 1 593 698 - -
Lan16g0561 952 Gene3D Transferase(Phosphotransferase) domain 1 699 917 - -
Lan16g0561 952 Gene3D Ribonuclease Inhibitor 295 402 IPR032675 -
Lan16g0561 952 Gene3D Ribonuclease Inhibitor 33 188 IPR032675 -
Lan16g0561 952 SUPERFAMILY L domain-like 49 389 - -
Lan16g0561 952 Pfam Leucine rich repeat 298 342 IPR001611 GO:0005515
Lan16g0561 952 Pfam Leucine rich repeat 156 214 IPR001611 GO:0005515
Lan16g0561 952 SUPERFAMILY Protein kinase-like (PK-like) 608 914 IPR011009 -
Lan16g0561 952 ProSiteProfiles Protein kinase domain profile. 623 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0561 952 MobiDBLite consensus disorder prediction 901 936 - -
Lan16g0561 952 ProSiteProfiles Leucine-rich repeat profile. 275 296 IPR001611 GO:0005515
Lan16g0561 952 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Lan16g0561 952 SMART LRR_typ_2 129 153 IPR003591 -
Lan16g0561 952 SMART LRR_typ_2 273 298 IPR003591 -
Lan16g0561 952 SMART LRR_typ_2 201 225 IPR003591 -
Lan16g0561 952 SMART LRR_typ_2 320 344 IPR003591 -
Lan16g0561 952 Pfam Protein kinase domain 624 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0561 952 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 931 - -
Lan16g0561 952 SMART serkin_6 623 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0561 952 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 14 931 - -
Lan16g0561 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Lan16g0561 952 CDD STKc_IRAK 629 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0561 Lan-Chr16 6630125 6646412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0561 19 905 Receptor kinase-like Gene Family AT5G01950 59.066 0.0 996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lan16g0561 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0561 - - gmx:100786467 1435.24