Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0559 ATGAAGTTCCTTTTTATCATATTTATTCTTTTTCCTCTTGCAATTGCTGACCTGAGTTCAGATAAGCAAGCTCTTCTTGATTTTGCTAATGCTATCCCTCACCGCCGGAACCTTATGTGGAATCCAGCCACCTCTATCTGTACATCTTGGGTAGGCATCACTTGCAATCAAAACAGAACTCGTGTTATCTATGTCCGGCTCCCTGGAGTTGGACTATGGGGTTCAATCCCAGCCAATACTCTTGGCAAGCTTGACGCCGTTAAGATTATTAGCCTTCGCTCCAACCTGCTCAGTGGAAATCTGCCTGCTGATATTGCTTCTCTTCCTTCACTACGGTATCTCTACCTTCAGAATAATAACCTTTCTGGTGATATACCTGCCTCATTGTCACCCAAACTCAATGTACTTGATTTGTCATATAATTCTTTCACTGGTGGTATTCCGGAGATTTTCCAGAATTTTACAGAACTAACTAGTTTGAATCTCCAGAAGAATTCCCTATCTGGAGAGATACCTAATCTTGATGTTAGTAAGCTCGGGCTTCTGAATTTAAGCTACAACCATTTCAATGGCTCTATCCCTGCAGCCCTTCAGATTTTTCCGAAGTCATCCTTTGAAGGAAACTCTCTTTTATGTGGACCACCTCTAAAGCCATGCTCCACTGTTACCTCTACACCTGCCTTGACTCCAAATGCATCTACGGCTCCTGGAACAAAAAGCTCCAAAAATAATCTGAGTAAGGTAGCTATCATTGCAATTGCTGTTGGAGGGGCAGTGGTGCTATTTTTCATAGCACTTGTTATTGTTCTTTGCTGTGTAAAGAAGAAAGACGAGGGAGGCTCCCGTGAAATTAAAGGGAAGGGTCCTAGTGGTGGTAGAGGTGAGAAGCCAAAAGAAGAGTTTGGGAGTGGAGTCCAAGAACCTGACAAAAACAAGTTGGTTTTCTTCGAGGGTAGTTCTTATAATTTTGATCTTGAGGATTTGCTAAGAGCTTCAGCCGAAGTTTTGGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCTGTAACAGTTGTGGTGAAAAGATTGAAAGAAGTTGTGGTAGGCAAGAGGGACTTTGAACAGCAGATGGAGATTATAGGAAGGGTCGGGCAACACCTAAATGTTGTGCCACTTCGCGCTTATTATTATTCGAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCAAGGTGGCAACCTATCCACACTCTTGCATGGAAATAGATCAGGTGGAAGAACTCCGTTGAATTGGGACACGCGGCTAAAAATATCCCTCGGAACAGCAAGAGGAATTGCCCACATACATTCTGCTGGTGGTCCAAAATTCACACATGGAAATATTAAGTCCTCAAATGTCCTCCTCAACCAAGAGAATGATGGCTGCATTTCTGATTTTGGCCTAACCCCACTAATGAATGTTCCTGCAACCCCTTTTAGAGCTGCAGGTTATCGTGCTCCTGAGGTAATTGAAATGCGTAAGCACACTCATAAATCAGATGTGTATAGCTTTGGCGTTCTCCTTCTAGAGATGCTTACTGGGAAATCACCTATCCAATCTCCTGGACATGATGACATTGTTGATCTCCCGAGGTGGGTACAGTCTGTTGTAAGGGAGGAATGGACAGCCGAGGTTTTCGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTACAAATGTTGCAAATAGCCATGGCTTGTGTAGCAAAGATGCCAGATATGAGACCCAGCATGGATGACGTAGTGAAAATGATCGACGATATCAGGCAATTTGACTTGGAGAACCGACCCTCTAACGAAGAGACCAAATCCAAGGACTCAAATGTTCTAACACCATAA 1878 0.4302 MKFLFIIFILFPLAIADLSSDKQALLDFANAIPHRRNLMWNPATSICTSWVGITCNQNRTRVIYVRLPGVGLWGSIPANTLGKLDAVKIISLRSNLLSGNLPADIASLPSLRYLYLQNNNLSGDIPASLSPKLNVLDLSYNSFTGGIPEIFQNFTELTSLNLQKNSLSGEIPNLDVSKLGLLNLSYNHFNGSIPAALQIFPKSSFEGNSLLCGPPLKPCSTVTSTPALTPNASTAPGTKSSKNNLSKVAIIAIAVGGAVVLFFIALVIVLCCVKKKDEGGSREIKGKGPSGGRGEKPKEEFGSGVQEPDKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESVTVVVKRLKEVVVGKRDFEQQMEIIGRVGQHLNVVPLRAYYYSKDEKLLVYDYVQGGNLSTLLHGNRSGGRTPLNWDTRLKISLGTARGIAHIHSAGGPKFTHGNIKSSNVLLNQENDGCISDFGLTPLMNVPATPFRAAGYRAPEVIEMRKHTHKSDVYSFGVLLLEMLTGKSPIQSPGHDDIVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDDVVKMIDDIRQFDLENRPSNEETKSKDSNVLTP* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0559 625 ProSiteProfiles Protein kinase domain profile. 330 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0559 625 SUPERFAMILY L domain-like 20 219 - -
Lan16g0559 625 Gene3D Ribonuclease Inhibitor 176 220 IPR032675 -
Lan16g0559 625 CDD STKc_IRAK 336 601 - -
Lan16g0559 625 PANTHER OS05G0588300 PROTEIN 2 625 - -
Lan16g0559 625 PANTHER LRR RECEPTOR-LIKE KINASE 2 625 - -
Lan16g0559 625 Pfam Protein kinase domain 333 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0559 625 Gene3D Ribonuclease Inhibitor 18 175 IPR032675 -
Lan16g0559 625 Pfam Leucine rich repeat 75 121 IPR001611 GO:0005515
Lan16g0559 625 SUPERFAMILY Protein kinase-like (PK-like) 334 605 IPR011009 -
Lan16g0559 625 MobiDBLite consensus disorder prediction 279 306 - -
Lan16g0559 625 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515
Lan16g0559 625 ProSitePatterns Protein kinases ATP-binding region signature. 336 367 IPR017441 GO:0005524
Lan16g0559 625 Pfam Leucine rich repeat N-terminal domain 19 56 IPR013210 -
Lan16g0559 625 Gene3D Phosphorylase Kinase; domain 1 299 405 - -
Lan16g0559 625 Gene3D Transferase(Phosphotransferase) domain 1 406 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0559 Lan-Chr16 6584678 6588745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0559 1 622 Receptor kinase-like Gene Family AT5G58300 66.932 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan16g0559 Pkinase 1.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0559 - - gmx:100796171 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0268 4 4384628 4388835 Lan16g0559 16 6584678 6588745 LSH
Lan2g1054 2 21814814 21819469 Lan16g0559 16 6584678 6588745 LSH
Lan16g0559 16 6584678 6588745 Lan2g1054 2 21814814 21819469 PCT
Lan2g1054 2 21814814 21819469 Lan16g0559 16 6584678 6588745 PCT