Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0556 ATGGCAGATGAAGCACGCAATGATTTGAAGGAGGAGGTCCCAGAAGTTGTGCCATTTGATCCTACTAAGAAGAAGAAGAAAAAGAAAATCACCATTATTGATCCTGCTGACGACCCAGTTGATAAATTGGCTGAAAAGACAGAAAATCTCTCAGTTTCTGAAGGTGTTGAGAGTACCTTTGCTGGTTTGAAAAAGAAGAAAAAGAAGCCGGTTGAAATCAGTAACTTAAATGATGAGAGTGGCGATGTACCTGAAGATGTGGATGCCTTAGATCCCGCTGAAGAAGATGAAGATGACATTTCTTCCTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAATATGAGGAGCTTCTGGGCAGGGTGTTTAACATTTTACGCGAGAATAATCCAGAACTTGCTGGAGACCGGCGGAGGACCGTCATGAGGCCTCCGCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGTAAAACAATGCATCGGCAGCCAGACCATGTCATGGCTTTTCTGCTTGCTGAGTTGGGTACTAGTGGCTCTTTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTCTGCGACGATACATCAATGAATATGTCATTTGCCTCGGATGCAAAAGTCCTGACACCATACTTAGCAAGGAGAATCGTCTCTTCTTTCTTCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAATGCAGGCACATAA 813 0.4379 MADEARNDLKEEVPEVVPFDPTKKKKKKKITIIDPADDPVDKLAEKTENLSVSEGVESTFAGLKKKKKKPVEISNLNDESGDVPEDVDALDPAEEDEDDISSLQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0556 270 MobiDBLite consensus disorder prediction 60 75 - -
Lan16g0556 270 SMART eIF2Bneu4 140 249 IPR002735 GO:0003743|GO:0006413
Lan16g0556 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 270 - -
Lan16g0556 270 MobiDBLite consensus disorder prediction 1 111 - -
Lan16g0556 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 254 IPR016190 GO:0003743|GO:0006413
Lan16g0556 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 222 IPR016189 GO:0003743|GO:0006413
Lan16g0556 270 MobiDBLite consensus disorder prediction 79 98 - -
Lan16g0556 270 Pfam Domain found in IF2B/IF5 139 248 IPR002735 GO:0003743|GO:0006413
Lan16g0556 270 MobiDBLite consensus disorder prediction 30 48 - -
Lan16g0556 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 270 IPR045196 GO:0003743|GO:0006413
Lan16g0556 270 MobiDBLite consensus disorder prediction 1 22 - -
Lan16g0556 270 Gene3D - 113 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0556 Lan-Chr16 6544819 6548536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0556 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 75.281 6.69e-137 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0556 K03238 - gmx:100783618 473.781