Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0554 ATGGATCTCCTCATGTTGGAGAAGACTCTCATTGCTTTATTTATAACTATCGTGACTGCAATCGTGACCGCAAAGTTCCGTGGGAAGCGTTTAAAACTCCCACCGAGCCCATTGCCAGTTCCTATTTTTGGGAACTGGCTCCAAGTTGGCGATGACCTTAACCACCGCAACCTCACCGACCTCGCGAAGAAATTCGGCGACATCTTCCTCCTCCGTATGGGTCAGCGCAACCTCGTCGTAGTATCCTCCCCGGAACTCGCCAAAGAGGTTCTCCACACACAGGGCGTGGAGTTCGGCTCTCGAACCCGCAACGTCGTCTTCGACATCTTCACCGGAAAAGGACAAGACATGGTGTTCACGGTGTACGGAGAGCATTGGCGTAAAATGCGGAGGATTATGACGGTGCCGTTTTTCACCAACAAGGTGGTTCAGCAGTACCGGTTCGGGTGGGAGGATGAGGCGGCGCGTGTGGTTGACGACGTGAGGAAGAGCGGTGAAGCTGTAACAACAGGGATTGTGTTGAGGAAAAGGTTGCAACTAATGATGTACAATAACATGTATAGGATCATGTTTGATAAAAGGTTCGAGAACATGGAGGATCCTTTGTTTCAGAAGCTTAGGACTTTGAATGGTGAAAGAAGCCGTTTGGCTCAGAGTTTTGAGTACAATTATGGTGATTTTATACCTATCTTGAGACCCTTCTTAAGAGGGTACTTGAAAATTTGTAAGGAGGTTAAGGACACGAGGTTTCAGATTTTCAAGGACTATTTCGTTGAAGAAAGAAAGAAGCTTGAGAGTACAAAGAGAACTGAGAATGAAGGATTGAAATGTGCCATTGATCACATTCTGGATGCCCAGAAAAAAGGAGAGATCAATGAAGACAACGTTCTTTACATTGTTGAGAATATTAACGTTGCTGCAATTGAGACAACACTATGGTCAATTGAATGGGGCATTGCTGAACTTGTGAACAACCAAGAGATCCAACAAAAAGTTCGTAACGAAATTGACTCAGTTCTAGGACCAGGACACCAAGTAACTGAGCCAGATACCCACAAGCTCCCATACCTACAGGCAGTGATCAAAGAAACACTTCGTCTTAGAATGGCAATTCCACTCCTTGTGCCACACATGAACCTTCACGACGCGAAGCTTGGCCGATACGACATTCCTGCTGAAAGTAAGATCTTGGTTAATGCATGGTGGCTTGCAAACAACCCTGCACATTGGAAAAACCCAGAGGAGTTTAGGCCTGAGAGGTTTTTGGAGGAAGAGTCTAAAGTTGAGGCCAATGGGAATGACTTTAGGTACCTTCCATTTGGTGTTGGGAGAAGAAGTTGCCCTGGGATTATTCTTGCATTGCCTATACTTGGCATTACTTTAGGACGTTTGGTCCAAAATTTTGAGCTTTTGCCACCCCCTGGAGAGGACAAGCTTGATACTACTGAGAAAGGAGGACAGTTTAGTTTGCACATACTGAATCATTCTACTATTGTTGCTAAACCAAGATCATTTTAG 1518 0.4532 MDLLMLEKTLIALFITIVTAIVTAKFRGKRLKLPPSPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVDDVRKSGEAVTTGIVLRKRLQLMMYNNMYRIMFDKRFENMEDPLFQKLRTLNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKDTRFQIFKDYFVEERKKLESTKRTENEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNNQEIQQKVRNEIDSVLGPGHQVTEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGRYDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGEDKLDTTEKGGQFSLHILNHSTIVAKPRSF* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0554 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lan16g0554 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Lan16g0554 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0554 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0554 Lan-Chr16 6523733 6527234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0554 1 504 Monolignol Biosynthesis Gene Families AT2G30490 82.738 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0554 K00487 - nnu:104593756 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1050 2 21760993 21765186 Lan16g0554 16 6523733 6527234 LSH
Lan16g0554 16 6523733 6527234 Lan2g1050 2 21760993 21765186 PCT
Lan2g1050 2 21760993 21765186 Lan16g0554 16 6523733 6527234 PCT