Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0553 ATGGCAGAGAACAATGTAGTTTTGTTGGATTTTTGGCCAAGTTCTTATGGAATGAGGGTGAAGATCGCTTTGGCAGAGAAAGGAGTCTCATATGAGTGCAAACAAGAAGATTTTCAAGCTAAAAGTTCTTTGCTTTTAGAGATGAACCCAGTTCACAAAATGATCCCAGTTTTGATTCATAATGGAAAATCCATAAGTGAATCACTAAACATTGTTGAGTACATTGATGACATTTGGAACCACAAATATTCTCTGCTGCCTTCTGACCCTTACAAGCGATCACAAGCTAGGTTTTGGGGTGATTTCATTGACAAAAATGTATACAGCATTGGGAAAAGGGTATGGACAGTGAAGGGTGAAGAACAAGAACTAGGGAAGAAGCAATTTATAGAGTGCTTAAAGAAGTTGGAAGAAGTGCTTGGAGATAATCCATATTTTGGTGGTGAAAACTTTGGGTATTTTGATGTTGCTCTTGTTCCCTTTACTAGTTGGTTTTACACATATGAGACCTTTGGGAATCTTAGCATAGAGGCAGAGTGTCCTAAACTTGTGGCTTGGGCCAAGAGGTGCATTGAAAAAGAGAGTGTGGCTAAGTCACTTCCTCATCCTCACAAGATTTATGAGTTTGCTTTGGAATATAAACAGAGACATGGATTTGAGTAG 663 0.3876 MAENNVVLLDFWPSSYGMRVKIALAEKGVSYECKQEDFQAKSSLLLEMNPVHKMIPVLIHNGKSISESLNIVEYIDDIWNHKYSLLPSDPYKRSQARFWGDFIDKNVYSIGKRVWTVKGEEQELGKKQFIECLKKLEEVLGDNPYFGGENFGYFDVALVPFTSWFYTYETFGNLSIEAECPKLVAWAKRCIEKESVAKSLPHPHKIYEFALEYKQRHGFE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0553 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Lan16g0553 220 Pfam Glutathione S-transferase, C-terminal domain 126 189 - -
Lan16g0553 220 Gene3D Glutaredoxin 1 88 - -
Lan16g0553 220 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Lan16g0553 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Lan16g0553 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 215 IPR045073 -
Lan16g0553 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 215 - -
Lan16g0553 220 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Lan16g0553 220 Gene3D - 89 220 - -
Lan16g0553 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lan16g0553 220 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Lan16g0553 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lan16g0553 220 CDD GST_N_Tau 6 79 - -
Lan16g0553 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0553 Lan-Chr16 6520413 6522019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0553 4 216 Glutathione S-transferase Gene Family AT1G78380 61.033 8.21e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0553 K00799 - gmx:100527221 377.867