Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0548 ATGCAACACCTTCCTTCCGAACCTAACCCTAATCCCAATCCTAATGAACATTTCCCGCAACCACCTTCCACATCTCCGGCCACGGCGGCGACGCCAACCGCCGCCATCTCCACTTTCACCGGCGTCGCTTCTGCCGAAGACGGGGAATCTCACTCCCACCACCGTCGATCCCATTCCGAGATGAGTTTCCGGCTGCCGGACGACATGATGGACTTATCGCCGTCTGATCCGTTCAACGGCGGTTCTTCCACCGCCAGCATGGAGGAGATCGGATCGGAGGAAGACCTCTTCTCCACCTACATTGACGTGGAGAAGATCGGAGGAGCAACGAATGGGTCAGGTTACGCTGAAAATGGATCGGAGCAGGTCGGTTATGGGAACAACAGTAGCGGCTCCGGCGCCGGAACGAGTGGTAAAAATGACGGAGAGAATAGCCCGAGGCCCAGGCACAAGTATAGTAGCTCCGTCGATGGTTCCACGTCGACGAGCATGTTGGGAGAGATCATTGAGGCGAAGAAAGCAATGCCTCCTGATAAGCTCGCTGAATTATGGACCGTTGATCCAAAACGTGCTAAGAGAATACTTGCGAATCGGCAATCTGCTGCACGCTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCGCAAAGTTCACACCCTTCAAACTGAAGCCACAACTCTTTCTGCCCAACTGACACTATTCCAGAGGGACACAACTGGTCTGAGTTCTGAAAATACAGAGCTTAAGATCCGTCTGCAAGGCATGGAGCAACAGGCACAGCTTCGCAACGCTCTCAATGATGCATTGATGAAGGAAATTGAGAGGCTTAAGATTGCTACAGGAGAGGCAATGAACCTCCCTGAGTCTTCGATTATGGGAATGCACCAGATGCCATATGCAGGGTCAAATTTCTTTCCAATGCCACCACACTCAGATCCTTCTGGTCATCAGAACATACAGTTGCCTCCATTCGGTCACGCTCCATCTAGCATGCCAACTCATCAACTTCAACAATCAAATTCTCAGCAACTCTCGGACATGTTGCAAAATGATCAACTCGGTCGTTTACAGGGACTTGACATTAGCAACAAAGGGTCAAGCATAGTGAAGCCTGAAGGCCCCTCAGTTTCTGCAAGTGAGAGCAGCACTACATTTTGA 1164 0.5095 MQHLPSEPNPNPNPNEHFPQPPSTSPATAATPTAAISTFTGVASAEDGESHSHHRRSHSEMSFRLPDDMMDLSPSDPFNGGSSTASMEEIGSEEDLFSTYIDVEKIGGATNGSGYAENGSEQVGYGNNSSGSGAGTSGKNDGENSPRPRHKYSSSVDGSTSTSMLGEIIEAKKAMPPDKLAELWTVDPKRAKRILANRQSAARSKERKARYIQELERKVHTLQTEATTLSAQLTLFQRDTTGLSSENTELKIRLQGMEQQAQLRNALNDALMKEIERLKIATGEAMNLPESSIMGMHQMPYAGSNFFPMPPHSDPSGHQNIQLPPFGHAPSSMPTHQLQQSNSQQLSDMLQNDQLGRLQGLDISNKGSSIVKPEGPSVSASESSTTF* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0548 387 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 384 - -
Lan16g0548 387 MobiDBLite consensus disorder prediction 47 65 - -
Lan16g0548 387 PANTHER BZIP TRANSCRIPTION FACTOR 7 384 - -
Lan16g0548 387 MobiDBLite consensus disorder prediction 332 387 - -
Lan16g0548 387 Coils Coil 205 232 - -
Lan16g0548 387 MobiDBLite consensus disorder prediction 113 142 - -
Lan16g0548 387 MobiDBLite consensus disorder prediction 22 45 - -
Lan16g0548 387 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 250 IPR004827 GO:0003700|GO:0006355
Lan16g0548 387 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Lan16g0548 387 Pfam bZIP transcription factor 189 246 IPR004827 GO:0003700|GO:0006355
Lan16g0548 387 MobiDBLite consensus disorder prediction 112 161 - -
Lan16g0548 387 MobiDBLite consensus disorder prediction 7 21 - -
Lan16g0548 387 Gene3D - 188 260 - -
Lan16g0548 387 MobiDBLite consensus disorder prediction 310 387 - -
Lan16g0548 387 SUPERFAMILY Leucine zipper domain 189 240 IPR046347 GO:0003700|GO:0006355
Lan16g0548 387 CDD bZIP_plant_RF2 190 239 IPR044759 GO:0003700|GO:0006355
Lan16g0548 387 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0548 Lan-Chr16 6379343 6383147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0548 53 387 bZIP Transcription Factor Family AT2G40620 49.051 8.01e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan16g0548 bZIP_1 1.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0548 - - gmx:100775607 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1049 2 21734446 21737390 Lan16g0548 16 6379343 6383147 LSH
Lan16g0548 16 6379343 6383147 Lan2g1049 2 21734446 21737390 PCT
Lan16g0548 16 6379343 6383147 Lan9g1243 9 19715464 19718141 PCT
Lan2g1049 2 21734446 21737390 Lan16g0548 16 6379343 6383147 PCT
Lan9g1243 9 19715464 19718141 Lan16g0548 16 6379343 6383147 PCT