Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0532 ATGGCACTTTCCTCTTCTAATTCTTCTTCTCCTTCATATTTCTCTTCATCACGCATTGTTGCATTATTTGTGTTGCTGCTTCTCACAGGGACATGTTCAGCTAAACTATCTGAAAACTTCTATTCTCAGACATGTCCCGAAGTTTTCAAGACTGTAAAATCTGTTGTTAAATCTGCTATTGCCAATGAACCTCGCATTGGAGCTTCTATCCTTAGACTCTTCTTCCATGACTGCTTTGTGGATGGTTGCGATGGTTCAGTATTACTGGATGATACTTCATCCTTCAGAGGAGAGAAAACAGCAGCTGCAAACAACAACTCTTTGAGAGGTTTTGAAGTAATTGATTCTATAAAGACAAAAGTGGAATCAATATGCCCTGGTGTGGTGTCTTGTGCTGATATTTTGGCCATTGCTTCTCGTGACTCTGTTGTCATTCTTGGAGGACCTTTCTGGAATGTTAAAGGTGGAAGAAGGGATTCAAGAACAGCAAACTTCAATGCTGCTAACAGTGGTGTGATTCCAGCTCCCAACTCTAATCTCAGTAATCTCATCTCAAAATTTCATGATCAAGGGCTATCTGTCAAGGATATGGTTGCATTATCTGGATCTCACACAATTGGGAAGTCAAGGTGTAGTAGTTTCAGAGATCGCATATACAACGAAAGCAATATCGACTCTACATTTGCTAAGGCCAAACAGAGCAAGTGTCCATGTACTAGTGGCTCAGCAGATAACAATTTAGCATTCTTAGATTTCCAAACTCCTAATCATTTTGACAATAACTACTTCAAAAACCTTATCAACCAAAGGGGTCTCCTTCATTCTGATCAGGTTCTCTTCAATGGTGGATCTACTGACTCACTTGTTTTAACTTACAGCCTCAATGATAAGATCTTCTATTCTGACTTTGTTATTGGAATGATTAAGATGGGAAATAATAAACCCTTAACTGGGTCACAAGGGGAGATAAGGAAGAACTGTAGGGTCCTGAATTAG 996 0.3946 MALSSSNSSSPSYFSSSRIVALFVLLLLTGTCSAKLSENFYSQTCPEVFKTVKSVVKSAIANEPRIGASILRLFFHDCFVDGCDGSVLLDDTSSFRGEKTAAANNNSLRGFEVIDSIKTKVESICPGVVSCADILAIASRDSVVILGGPFWNVKGGRRDSRTANFNAANSGVIPAPNSNLSNLISKFHDQGLSVKDMVALSGSHTIGKSRCSSFRDRIYNESNIDSTFAKAKQSKCPCTSGSADNNLAFLDFQTPNHFDNNYFKNLINQRGLLHSDQVLFNGGSTDSLVLTYSLNDKIFYSDFVIGMIKMGNNKPLTGSQGEIRKNCRVLN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0532 331 Gene3D - 39 328 - -
Lan16g0532 331 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601|GO:0042744
Lan16g0532 331 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 SUPERFAMILY Heme-dependent peroxidases 36 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Lan16g0532 331 PANTHER PEROXIDASE 19 328 - -
Lan16g0532 331 PANTHER PEROXIDASE 72-RELATED 19 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 ProSiteProfiles Plant heme peroxidase family profile. 35 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan16g0532 331 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Lan16g0532 331 Gene3D Peroxidase, domain 2 174 310 - -
Lan16g0532 331 Pfam Peroxidase 52 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0532 Lan-Chr16 6192486 6196673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0532 34 327 Peroxidase AT5G05340 68.707 7.79e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0532 K00430 - gmx:100813384 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0532 16 6192486 6196673 Lan9g1236 9 19659135 19662593 PCT
Lan9g1236 9 19659135 19662593 Lan16g0532 16 6192486 6196673 PCT