Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0511 ATGGCAGTGGAAGAAACCCCAAAATCAACCATCACTGACGATCAAATCATCACAAACCCTAACAACAACAACAACAACGACGACGACGCTGATCATGAGGAGGGAGAGATCCTCGACGGCGATGAATCCGCCACATCTAAGCCTTCCTCCGCCGCCGCCGCCGATCCTCACCCGCTCGAGAATTCATGGACCTTCTGGTTCGATAACCCTTCCGCTAAGTCCAAACAAGTCGCTTGGGGAAGCTCCATAAGAAACATATACACCTTCTCTACTGTTGAAGAGTTTTGGAGCATTTACAATAACATACATCATCCAAGCAAGTTGGCTATGGGAGCAGATTTCCATTGTTTCAAGCATAAGATTGAGCCAAAATGGGAGGACCCCATTTGTGCTAATGGAGGCAAATGGACTGCGACCTTTCCTCGGGGGAAATCTGATACTAGTTGGTTATATACGTTGTTGGCAATGATTGGAGAGCAATTTGATCATGGAGATGAAATTTGCGGAGCAGTTGTGAATGTCCGAAGTAGGCAGGATAAAATTTCTATTTGGACTAAGAATGCTGCCAATGAAGCTGCTCAGATGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTACAATGACACCATTGGCTTTATATTTCATGAGGATGCAAAGAAGAATGACAGAGCTTCTAATAAAAATAAATACACCATATGA 702 0.4402 MAVEETPKSTITDDQIITNPNNNNNNDDDADHEEGEILDGDESATSKPSSAAAADPHPLENSWTFWFDNPSAKSKQVAWGSSIRNIYTFSTVEEFWSIYNNIHHPSKLAMGADFHCFKHKIEPKWEDPICANGGKWTATFPRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRSRQDKISIWTKNAANEAAQMSIGKQWKEFLDYNDTIGFIFHEDAKKNDRASNKNKYTI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0511 233 MobiDBLite consensus disorder prediction 1 56 - -
Lan16g0511 233 Gene3D RNA Cap, Translation Initiation Factor Eif4e 49 233 IPR023398 -
Lan16g0511 233 MobiDBLite consensus disorder prediction 8 25 - -
Lan16g0511 233 ProSitePatterns Eukaryotic initiation factor 4E signature. 113 136 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lan16g0511 233 SUPERFAMILY eIF4e-like 28 225 IPR023398 -
Lan16g0511 233 Pfam Eukaryotic initiation factor 4E 58 209 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan16g0511 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 233 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan16g0511 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0511 Lan-Chr16 5354574 5356923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0511 1 232 Eukaryotic Initiation Factors Gene Family AT4G18040 66.383 2.97e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0511 K03259 - gmx:100499636 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0511 16 5354574 5356923 Lan16g0511 16 5354574 5356923 ECH
Lan4g0328 4 5412500 5414653 Lan16g0511 16 5354574 5356923 LSH