Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0508 ATGGAACAAAACACAAAGGAAACACCACCATCATCATCAAAAGATGAAAAAAAGAAAGCTACCCAGAAAGTTTCCTTCTTCAAGCTCTTCACTTTTGCTGATAAACTTGACGTTACACTCATGATCATAGGCACTGTCTTTTCCATGGCTAATGGCTTGGCTAATCCTATCATGATTATGGTTTTTGGGAGGCTCATTAACACATTTGGTATAACAGATCCAGCACATATGACTCATGAAGTTTCTAAGGTTTCATTGTTATTTGTTTACCTGGCTATTGGGATTGGAATTTCCTCCTTTTTACAGGTATCATGCTGGATGGTAACAGGAGAAAGACAAGCAGCTAGGATCCGTAGTTTGTACTTGAATACTATATTGAAACAAGACATTGCTTTCTTTGACACTGAAACAACAACTGGAGAGGTTATTGGGAGAATGTCTGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATACAACTTGCTTCAACTTTTATTGGTGGCTTTGTTATTGCCTTCATAAAAGGATGGGAAATGGCTGTAGTTTTGCTTGCATGTATACCTTTAGTCATCATTGTTGGAGGAACCATGTCCATGATGATGTCTAAAATGTCAAGTAGAGGCCAAATTGCTTATGCAAAAGCAGGAAATGTTGTTGAACAAACAGTTGGAGCCATTAGAACAGTTGCATCTTTCACTGGGGAGAAAAAAGCCATAGAAATGTATAATATCAAGTTAAAAGATGCTTATAATACAATGGTTCAACAAGAGTTGGCTTCAGGGATAGGAATGGGAGTACTCTTGTTAATTGTTTATAGCACCTATGGACTTGCCGTGTGGTATGGTTCCAAATTGATCATTGAGAAAGGATACAATGGTGGAACTGTCATGAATATAATCATATCTCTTATGACAGGTGGAATGTCACTTGGTCAAACATCCCCAAGCCTTAATGCATTTGCAGCAGGACAAGCAGCAGCATATAAAATGTTTAACACAATCAAAAGAAAGCCCAAAATTGATGCTTATGACACAAAAGGTGTTGTATTGGAAGACATAAGGGGAGATATTGAACTAAGAGATGTTCATTTCAGTTATCCTGCAAGGCCAGATGAGAAAATCTTTGCTGGATTCTCATTATATGTTCCAAGTGGTACAACTGCTGCATTAGTAGGCCAAAGTGGAAGTGGAAAGTCCACTGTAATAAGCTTGTTAGAAAGATTCTATGATCCTGATGCTGGAGAAGTACTCATAGATGGTTTGAATCTGAAAAGGTTTCAAGTTAGATGGATTAGAGAACAGATTGGACTTGTTGGTCAAGAGCCTGTTTTGTTTGCAGCCAGTATCAGAGAGAACATATCATATGGCAAAGAAGGTGCAACTGATGAAGAGATTAATACAGCAATAACACTTTCTAATGCCAAAAAGTTCATTGACAAGCTTCCTCAGGGCCTTGACACAATGGCAGGAGAGCATGGAGCTCAACTTTCTGGTGGGCAAAAGCAAAGGATTGCTATTGCAAGGGCTATTTTGAAGAATCCAAGAATTATTCTTCTTGATGAAGCTACAAGTGCATTGGATGCTGAGTCTGAACGTATTGTTCAAGAAGCGTTAGAGAGAGTTATGTCAAACCGGACTACTGTAGTTGTCGCACATCGTTTGACAACTATTACACATGCTGACACCATAGCAGTGGTTCATAAAGGAAAAATTGTGGAACAAGGAACTCATGATGAGTTAACCAAGGATCCCGAGGGTGCTTTTTCTCAGCTTATTCGTCTACAAGAAGGAGAAAAGGAAGGTGAAGCAATCCAGAATTCCGAGGCAGATAAGCCAAATAATAGTTTTAATTCAGGTAGTCACACAAGTAGATCGAATAGCCGAGGTTCATCAAGGAGTAGACACTCTCTGTCATTCAGCAGTATTCTTCCTTATCAAAGTGTGGTAGATCAGTCTGGAGAAAGAGCAAATTTTGATATTGAAAAAAGTGAAGTTCATGATGTGAGTCACAAAAAGTTTTCTATAAAACGCTTGGCCTATTTGAACAAGCCTGAGATTCCTTTCTTAGTGCTTGGATCAATTGGTGCAGCAGTACAAGGTGTAGTGTTCCCTGTATTTGGCCTCTTGATTTCATCAGCAATTACTATGTTCTTTGAACCTCCAAAGCAGCTGAGGAAAGATTCAGTTTTTTGGGCACTTATATATATGGGTTTGGGTTTTGTTTCTCTGGTGGCCTTACCAACTATGAATTACTTCTTTGGGATTGCTGGTGGAAGACTTATAGAAAGAATTCGATCATTGACATTCGAAAAGGTTGTCCACCAAGAAATCACTTGGTTTGATTATCCTTCCAATTCAAGTGGTGCAGTTAGTGCAAGGTTATCTACTGATGCTTCAACAGTGAAAACTCTTGTTGGGAACACCTTGGCACTCATTGTGCAAAACACAGCAACAATCACAGCAGGTCTAGTTATAGCATTCACGGCTAATTGGATTCTCGCTTTTATAGTATTGGCTGTGTCACCCGTGATCCTCGTTCAAGGAGTCCTTCAGATGAGGTTTCTAAAAGGATTCAGTGACGACGCTAAGGTGAAGTATGAAGAAGCAAGTCAAGTGGCAAATGATGCTGTTGGTAGCATCAGAACCGTTGCAGCATTTTGCGCTGAACCAAAAGTGATGGATATGTATACGAGTAAATGCATAGGTCCCGAAAAACAAGGTGTTAAGTTGGGGCTTATTAGTGGTATAGGATTTGGTTTCTCCTATTTTGCTATGTACTGCACAAATGCGTTCTGTTTCTACATAGGATCCGTTCTTGTGCAACATGGGAAAGCAACCTTTCCCGAGGTTTTCAAGGTTTTTATTTCGTTAACAGTGACCGCAATCAGTGTTTCTCAGACTAGTTCCTTGGCATCAGACACTAACAAGGCCAAAGAATCTGCTGCTTCAATATTTGATATACTTGACAGAAAACCAGAGATTGATTCCAGCAGCACTGAGGGTACAACACTAGAAACTGTTACTGGTGATATTGAACTTCAACATGTCAGCTTTAAATACCCAACAAGGCCTGATATTCAAATTTTAAAAGATTTGTGCCTAAAAATCCCAGCTGGAAAGACTGTTGCATTGGTTGGAGAAAGTGGCTGCGGAAAATCAACAATTATAAGCCTCTTAGAGAGATTTTACAATCCTGATTCAGGACTAGTACTACTAGATGGAGTGGATATCAGAAAGTTCAGACTAAGTTGGTTAAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATTCGCTCCAACATAGCATATGGCAAAGAAGACGCGACCGAAGAAGAGATAGTAGCAGCAGCACAAACAGCAAATGCACACAAGTTCATAAGTTATCTTCCAAATGGTTATGACACTTGTGTTGGAGAAAGAGGTACACAATTATCGGGTGGACAAAAGCAGCGCATCGCCATCGCAAGAGCTATGCTTAAACACCCGAAAATTCTTTTGCTTGATGAGGCAACAAGTGCACTTGATGAAGAGTCACAGCATATAGTTCAAGATGCTCTAGATAGAGTTAGTGTTAACAGAACTACTGTCGTGGTAGCTCATCGTCTTACGACAATTAAAGGGGCTGATATCATTGCAGTGCTGGTGAATGGTGTAGTTGCTGAAAAGGGAAGACATGATGCATTGATCGAGATTAATGATGGAGTTTATGCTTCAATGGTATCTCTACATAAGAGTGCATCATGA 3780 0.3976 MEQNTKETPPSSSKDEKKKATQKVSFFKLFTFADKLDVTLMIIGTVFSMANGLANPIMIMVFGRLINTFGITDPAHMTHEVSKVSLLFVYLAIGIGISSFLQVSCWMVTGERQAARIRSLYLNTILKQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFIQLASTFIGGFVIAFIKGWEMAVVLLACIPLVIIVGGTMSMMMSKMSSRGQIAYAKAGNVVEQTVGAIRTVASFTGEKKAIEMYNIKLKDAYNTMVQQELASGIGMGVLLLIVYSTYGLAVWYGSKLIIEKGYNGGTVMNIIISLMTGGMSLGQTSPSLNAFAAGQAAAYKMFNTIKRKPKIDAYDTKGVVLEDIRGDIELRDVHFSYPARPDEKIFAGFSLYVPSGTTAALVGQSGSGKSTVISLLERFYDPDAGEVLIDGLNLKRFQVRWIREQIGLVGQEPVLFAASIRENISYGKEGATDEEINTAITLSNAKKFIDKLPQGLDTMAGEHGAQLSGGQKQRIAIARAILKNPRIILLDEATSALDAESERIVQEALERVMSNRTTVVVAHRLTTITHADTIAVVHKGKIVEQGTHDELTKDPEGAFSQLIRLQEGEKEGEAIQNSEADKPNNSFNSGSHTSRSNSRGSSRSRHSLSFSSILPYQSVVDQSGERANFDIEKSEVHDVSHKKFSIKRLAYLNKPEIPFLVLGSIGAAVQGVVFPVFGLLISSAITMFFEPPKQLRKDSVFWALIYMGLGFVSLVALPTMNYFFGIAGGRLIERIRSLTFEKVVHQEITWFDYPSNSSGAVSARLSTDASTVKTLVGNTLALIVQNTATITAGLVIAFTANWILAFIVLAVSPVILVQGVLQMRFLKGFSDDAKVKYEEASQVANDAVGSIRTVAAFCAEPKVMDMYTSKCIGPEKQGVKLGLISGIGFGFSYFAMYCTNAFCFYIGSVLVQHGKATFPEVFKVFISLTVTAISVSQTSSLASDTNKAKESAASIFDILDRKPEIDSSSTEGTTLETVTGDIELQHVSFKYPTRPDIQILKDLCLKIPAGKTVALVGESGCGKSTIISLLERFYNPDSGLVLLDGVDIRKFRLSWLRQQMGLVGQEPILFNESIRSNIAYGKEDATEEEIVAAAQTANAHKFISYLPNGYDTCVGERGTQLSGGQKQRIAIARAMLKHPKILLLDEATSALDEESQHIVQDALDRVSVNRTTVVVAHRLTTIKGADIIAVLVNGVVAEKGRHDALIEINDGVYASMVSLHKSAS* 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0508 1259 Gene3D - 1007 1259 IPR027417 -
Lan16g0508 1259 SMART AAA_5 1044 1236 IPR003593 -
Lan16g0508 1259 SMART AAA_5 390 576 IPR003593 -
Lan16g0508 1259 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524
Lan16g0508 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 42 328 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0508 1259 Pfam ABC transporter 384 530 IPR003439 GO:0005524
Lan16g0508 1259 Pfam ABC transporter 1035 1184 IPR003439 GO:0005524
Lan16g0508 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Lan16g0508 1259 MobiDBLite consensus disorder prediction 605 641 - -
Lan16g0508 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 41 324 - -
Lan16g0508 1259 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 19 1256 - -
Lan16g0508 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1008 1254 IPR027417 -
Lan16g0508 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 685 1000 - -
Lan16g0508 1259 Gene3D ABC transporter type 1, transmembrane domain 86 927 IPR036640 GO:0005524|GO:0016021
Lan16g0508 1259 Pfam ABC transporter transmembrane region 697 967 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0508 1259 Pfam ABC transporter transmembrane region 41 313 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0508 1259 Gene3D - 361 632 IPR027417 -
Lan16g0508 1259 SUPERFAMILY ABC transporter transmembrane region 678 999 IPR036640 GO:0005524|GO:0016021
Lan16g0508 1259 MobiDBLite consensus disorder prediction 613 641 - -
Lan16g0508 1259 CDD ABC_MTABC3_MDL1_MDL2 363 601 - -
Lan16g0508 1259 CDD ABC_MTABC3_MDL1_MDL2 1017 1252 - -
Lan16g0508 1259 ProSitePatterns ABC transporters family signature. 1156 1170 IPR017871 GO:0005524
Lan16g0508 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 601 IPR027417 -
Lan16g0508 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1017 1253 IPR003439 GO:0005524
Lan16g0508 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 696 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0508 1259 SUPERFAMILY ABC transporter transmembrane region 28 347 IPR036640 GO:0005524|GO:0016021
Lan16g0508 1259 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 1256 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0508 Lan-Chr16 5326031 5334594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0508 9 1256 Calmodulin-binding Proteins AT2G36910 44.972 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0508 K05658 - gmx:100801771 1882.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0508 16 5326031 5334594 Lan16g0508 16 5326031 5334594 ECH