Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0507 ATGTCATGGTTTAGTTCAAGTTATAATGGTATCCTACTTCTTCTTCTTTTGTTACTACAGTTTTCCTATCAACTTGCAACTTGTGGCTCTATAGTAAAGAACCTTCCTGGGTTCCATGGACCCCTTCCTTTTATACTAGAAACTGGATATGTAGGAGTGGGTGAAAAAGAGGATGTGCAAGTTTTCTACTATTTCATTCAATCTGAGAATAATCCAAAGGAAGATCCTCTCATACTTTGGCTCACAGGAGGTCCTGGTTGTTCTGCTTTTTCTGGCCTTGTGCTTGAAATAGGTCCACTTGCATTTAAAATTGATGAATATAATGGGAGCCTGCCTAATTTGATCTTGAGACCACAGTCATGGACAAAGGTAAGTAGCATTATATTTGTAGATATGCCTGTTAATACAGGCTTCACATATGCAAGAACAGAATCTGCTACTGAGAGAAGTGATTGGAATCTAGTTCATCAAACTCATCAATTCCTTAGGAAGTGGCTAATTGATCATCCAGAATTTGTCTCTAATGAAGTTTACATTGGTGGTGATTCATATTCTGGTATTACTGTTCCAGTTATTGCTCATGAAATTGCACAAGCAAATGAGGAAGGGCTCCAACCACTGATAAACCTCCAGGGATACCTTCTAGGGAATGCTTTAACAACTCGAGCGGAAAGAAACTACGCGATTCCCTTTGCTCACGGAATGGGACTTATTTCTGATGAAATGTATGAGTCACTGCAAAAAAATTGCGAAGGAAATTATATCGATGCAGACACCAGAAATGCGCTATGTAGAAGAGACATCAAATCCTTTGATGATATTACATCAGGACTTAATATGGCACAAATTTTGGAACCATTATGTGAGTGGTTGTCGCCGAAACCAAGAGAAGTTTCTTGGAGGAGATCTGTAACACAGCAATTTCCTTTGAAGCTCAAGAATGCCCATCTCACTTTGCCTCCCTTAAGCTGTCAAAGTTATGCATACTATCTATGTGAATATTGGGCCAACGACGAAAATGTTCGTGATGCGCTGCACATAAGAAAGGGAAGTATAGGGAAATGGTCTCGTTGTACCTTCGGTATTCCTATGAAGATGGATATCGCTAGCAGCTTTCAATATCATGTAAATCTTAGTAGAAAAGGCTATCGTTCGCTGATATACAATGGCGATCATGATATGGGGGTTCCCTTCTCGGCGTCTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTTGATGATTGGAGGCAATGGCATACAAATGGCGAAGTTGCAGGATATACAAGAACGTACTCCAATCTGATGACATTTGCAACTGTGAAGGGTGGAAGCCACACAGCTCCTGAGTTAAAGCCAGATGAATGCTTTGCCATGTTCAAGAGGTGGATATCTAAGGGACCTTTGTAG 1410 0.4028 MSWFSSSYNGILLLLLLLLQFSYQLATCGSIVKNLPGFHGPLPFILETGYVGVGEKEDVQVFYYFIQSENNPKEDPLILWLTGGPGCSAFSGLVLEIGPLAFKIDEYNGSLPNLILRPQSWTKVSSIIFVDMPVNTGFTYARTESATERSDWNLVHQTHQFLRKWLIDHPEFVSNEVYIGGDSYSGITVPVIAHEIAQANEEGLQPLINLQGYLLGNALTTRAERNYAIPFAHGMGLISDEMYESLQKNCEGNYIDADTRNALCRRDIKSFDDITSGLNMAQILEPLCEWLSPKPREVSWRRSVTQQFPLKLKNAHLTLPPLSCQSYAYYLCEYWANDENVRDALHIRKGSIGKWSRCTFGIPMKMDIASSFQYHVNLSRKGYRSLIYNGDHDMGVPFSASQAWIRSLNYSIVDDWRQWHTNGEVAGYTRTYSNLMTFATVKGGSHTAPELKPDECFAMFKRWISKGPL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0507 469 SUPERFAMILY alpha/beta-Hydrolases 32 466 IPR029058 -
Lan16g0507 469 Gene3D alpha/beta hydrolase 28 294 IPR029058 -
Lan16g0507 469 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 10 466 - -
Lan16g0507 469 Pfam Serine carboxypeptidase 36 465 IPR001563 GO:0004185|GO:0006508
Lan16g0507 469 Gene3D - 323 468 - -
Lan16g0507 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Lan16g0507 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Lan16g0507 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Lan16g0507 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Lan16g0507 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 466 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0507 Lan-Chr16 5308151 5312877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0507 26 55 Calmodulin-binding Proteins AT2G22960 70.000 5.09e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0507 K16296 - gmx:100792006 746.117