Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0505 ATGAGACTTTCTTCAGCTGGTTTTAGTCCTCCACCCCTTGAAGGGGAAAAGAGATGTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCTCTTGTTTCATTGCCAGCAGTTGGAAGCCGTGTGTTTTACTTTCCACAAGGTCATAGTGAACAAGTGGCTGTGTCAACCAACAAGGAAGTGGATGCCCATATCCCAAACTATCCGAGCTTACCACCTCAGCTCATTTGCCAGCTTCATAATCTGACTATGCATGCTGATGCTGAGACTGATGAAGTATATGCACAGATGACCTTGCAGCCTTTGAATCCTCAAGAGCAAAAGGAAGCATACCTTCCAGCAGAGTTGGGCAATCCGAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACGGCCAGTGACACAAGTACTCATGGAGGATTCTCTGTTCCTCGTCGGGCTGCTGAAAAAGTGTTTCCTCCATTGGACTTCTCTCAACAGCCTCCCTGCCAAGAGTTAATTGCAAGGGATTTGCATGGTATTGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCCAAAAGGCATCTTCTTACAACTGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATGCTGTGCTGTTTATCTGGAATGAGAAGAACCAATTGCTTCTTGGCATTCGGCGGGCAAATCGACCACAAACTGTGATGCCTTCATCAGTTTTGTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCGGCAGCTCATGCAGCTGCAACAAATAGTCGCTTCACCATTTTCTATAATCCACGTGCTAGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATATTAAAGCTGTGTATCATACTCGGGTCTCTGTTGGTATGCGCTTCAGGATGCTGTTTGAAACAGAGGAGTCAAGTGTGAGACGATACATGGGAACAATAACTGGCATTAGTGACATGGATCCTGTTCGGTGGCCAAACTCACATTGGCGCTCAGTGAAGGTTGGCTGGGATGAATCCACTGCGGGAGATAGGCAACCTAGAGTGTCTCTATGGGAAATTGAGCCACTAACAACATTTCCCATGTATCCATCGCCGTTCCCACTTCGGCTTAAACGACCATGGCCTCCAGGGCTACCTTCATTTCATGGCATGAAGGATGAAGATTTTGGCATGAATTCTCCAATGATGTGGCTTCGAGACCCGGATAGAGGGCTTCAGTCTATTAACTTTCAGGGGATGGGGGTTAATCCTTGGGTGCAGCAAAGGTTTGATCCGTCCATGCTGAACATGCAAACAGATATGTATCAAGCTGCGGCTGCCGCTGCTCTTCCGGATATGAGGACTTTAGATCCTTCCAAACAGCACCCTGCTTCCTTAGTTCAATTTCCGCAACCACAGAACTTCCCGAACAGGACTGCCGCTTTAATGCAGGCCCAGATGTTGCAGCAGTCACAGTCTCTGGCTTTTCAAAATAATCAAGAGAATCAGCAGTCATCTCAATCTCAGGCACAAACTCAGATGCATCTTCAGCAGCAGCTACAGCACCAACACTCATTTAATAGTCAGCATCAGCTTCATCACAACCAGCAACAACAACCACAACAAATGCAGCAGCAGCAAAAGCAGCAACCGCAACAAATGGTAGATAATCAGCAGATTTCTAATGCAGTCTCTACAATGTCTCAGTTTATTTCGGCACCTCAATCTCAATCACCACTGATGCAAGCTATCTCTTCACTGTCCCAACAGCAAACGTTTTCTGATTCTAGTGCGAACCCTATCACTATTGTTTCTCCCCTGCACAATATCTTGGGTTCGTTTGCCCTGGATGAAAACGCCCACCTTCTGAACCTTCCTAGAACAAGCTCTTGGGTTCCTGTTCAGACTTCAACTGCATGGCCACCTGCCAAGCGCGTTGCAGTGGATCCTCTCCTTTCTTCGGGGGCATCTCAATGTGCTATGCTACAGGCAGATCAGTTGGGGCAGCCGCAGAGTACCATGTCTCAAAATGCTATTACATTACCCCCTTTTCCGGGTAGGGAGTGCTCAATAGATCAAGAAGGGAGCAATGATCCTCAAAATCATCTTTTATTTGGTGTTAATATAGAGCCCTCGTCACTTCTAGTTCAAAATGGGATGGCAGGCCTTAAGGGAGTCGGCGGCAACAATGACTCCCCAACCATGCCATTTCAGTCTTCTAATTTCATGAATAACACAGGCACTGACTCTTCGTTGAATCCTGGAATGACACATAACATTGGTGATTCAGGCTTCCTGCAGACCCAAGAAAACGCAGGGCAAGAAAACTCACCAAGCAAGACCTTTGTGAAGGTTTATAAGTCAGGGTCCTTCGGAAGATCATTAGATATCACTAAATTCAGCAGCTACCATGAACTGCGTAGTGAGCTTGCTCGTATGTTTGGCCTTGAAGGCGAGCTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAGTTTGTAAGTAGTGTATGGTGTATCAAGATACTTTCCCCTCAAGAAGTGCAGCAGATGGGCAACAACGGCCTTGAGCTTCTGAACTCGGTTCCAATTCAAAGGCTCTCTAATGGCATCTATGATGACTACATGAGCCGTCAGGACCCGAGAAGTCTAAGCACCGGAATAATAAGTGTGGGATCTTTAGAATACTAA 2730 0.4674 MRLSSAGFSPPPLEGEKRCLDSELWHACAGPLVSLPAVGSRVFYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGNPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDMDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDEDFGMNSPMMWLRDPDRGLQSINFQGMGVNPWVQQRFDPSMLNMQTDMYQAAAAAALPDMRTLDPSKQHPASLVQFPQPQNFPNRTAALMQAQMLQQSQSLAFQNNQENQQSSQSQAQTQMHLQQQLQHQHSFNSQHQLHHNQQQQPQQMQQQQKQQPQQMVDNQQISNAVSTMSQFISAPQSQSPLMQAISSLSQQQTFSDSSANPITIVSPLHNILGSFALDENAHLLNLPRTSSWVPVQTSTAWPPAKRVAVDPLLSSGASQCAMLQADQLGQPQSTMSQNAITLPPFPGRECSIDQEGSNDPQNHLLFGVNIEPSSLLVQNGMAGLKGVGGNNDSPTMPFQSSNFMNNTGTDSSLNPGMTHNIGDSGFLQTQENAGQENSPSKTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVSSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGIYDDYMSRQDPRSLSTGIISVGSLEY* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0505 909 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lan16g0505 909 PANTHER AUXIN RESPONSE FACTOR 1 889 - -
Lan16g0505 909 Pfam AUX/IAA family 764 861 IPR033389 -
Lan16g0505 909 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 889 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan16g0505 909 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lan16g0505 909 Gene3D - 291 363 - -
Lan16g0505 909 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lan16g0505 909 Gene3D - 125 228 IPR015300 -
Lan16g0505 909 SMART B3_2 127 229 IPR003340 GO:0003677
Lan16g0505 909 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan16g0505 909 Gene3D - 772 865 - -
Lan16g0505 909 ProSiteProfiles PB1 domain profile. 776 860 IPR000270 GO:0005515
Lan16g0505 909 MobiDBLite consensus disorder prediction 493 552 - -
Lan16g0505 909 CDD B3_DNA 126 227 IPR003340 GO:0003677
Lan16g0505 909 SUPERFAMILY CAD & PB1 domains 768 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0505 Lan-Chr16 5283302 5289628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0505 1 483 B3 DNA Binding Superfamily AT1G30330 84.631 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan16g0505 B3 1.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0505 - - gmx:100798719 1483