Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0498 ATGTTAGAAACCAGTGGTGACCGTGATTCTTGTCTCAGCTTAGAAACCCTCAATTCCTCAACCCAACGAACTTCAATGAGCAGCGAAAGCATTTGCAGCACCAGCTTCAGTCGTCTCTCTTTTGACTTCATTCCTACTTCCCCTGACTCCAACCTTTCCATCAAACCTCACCGTTCCTCCGATTTCGCCTACTCCGCCATCCGCTCCGCCACCTTCCGCCGTAAATCAGGCCTCACCTTCCGTGACTTCCACCTCCTCCGCCGCATCGGCGCAGGTGACATCGGCACAGTCTACCTCTGCCGACTCCGCACCGCCAACGCCGATGATGATGAGTTCGATAACACCATCGACGGTGACTCCGGGTGCTTCTATGCGATGAAGGTGGTGGATAAAGAAGCTGTTGCTTTGAAGAAAAAAGCGCAGAGAGCTGAAATGGAGAGAAAGATTTTGAAGATGCTGGATCATCCTTTTCTTCCTACGCTTTACGCTGAGTTTGAAGCTTCGCATTTTTCTTGCATTGTTATGGAGTTTTGTTCTGGCGGTGATTTACACTCGCTCCGTCATAAGCACCCTCATAAACGCTTCCCTCTTAACTCTGCAAGGTTTTACGCAGCTGAGGTACTGGTGGCATTAGAGTACCTTCACATGTTGGGAATCATTTACAGAGATCTGAAGCCTGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTCTCAGATTTTGATCTCTCACTCTGTTCAGATGCAATCCCAGCCGTTGAATCACCTCACGATCTTCCTCCATTCACACCTTACACCCGCTCCAATTCCACTCCATTATTCTCATGCCTCTCCAAGCGACTCTTCCGGTCCAGAAAGGTTCAAACGGTTCAACCAAACCGGTTATTCGTTGCTGAACCGGTTGGTGCACGGTCATGTTCTTTCGTCGGAACTCATGAATACGTGTCGCCGGAAGTAGCTTCTGGTAACTCACACGGCAACGCCGTTGACTGGTGGTCCTTTGGAATCTTCATGTATGAGCTTATATACGGTCGTACTCCATTTGCAGGACCATCAAATGAAGTTACACTGCGTAACATCATAAAGAAACCTCTCACTTTCCCTACTTCTACGCCCTCAACCTCGCTTGAGCTCCACGCGCGGGACCTAATTTCAGGTTTGCTTAATAAAGACCCGAACCGCAGGCTCGGGTCGAAGCGTGGCGCTGCTGACGTCAAGAAGCATCGGTTCTTTCAAGGGCTTAACCTTGCGCTTATCAGAATGCTTGCTCCGCCGGAGGTACCGTGCCTGAGAAGGAATAAAACGACGCCGTTGATTCCTGTTACGGGGAAGAGTAATGGAAGTAGTAGTAGGTTAGTGCCAACGGCGTCGTTTGATTACTTTTGA 1389 0.4946 MLETSGDRDSCLSLETLNSSTQRTSMSSESICSTSFSRLSFDFIPTSPDSNLSIKPHRSSDFAYSAIRSATFRRKSGLTFRDFHLLRRIGAGDIGTVYLCRLRTANADDDEFDNTIDGDSGCFYAMKVVDKEAVALKKKAQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKHPHKRFPLNSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPHDLPPFTPYTRSNSTPLFSCLSKRLFRSRKVQTVQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFMYELIYGRTPFAGPSNEVTLRNIIKKPLTFPTSTPSTSLELHARDLISGLLNKDPNRRLGSKRGAADVKKHRFFQGLNLALIRMLAPPEVPCLRRNKTTPLIPVTGKSNGSSSRLVPTASFDYF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0498 462 Gene3D Transferase(Phosphotransferase) domain 1 305 430 - -
Lan16g0498 462 Gene3D Transferase(Phosphotransferase) domain 1 178 245 - -
Lan16g0498 462 ProSiteProfiles Protein kinase domain profile. 83 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0498 462 Pfam Protein kinase domain 306 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0498 462 Pfam Protein kinase domain 117 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0498 462 PANTHER FLIPPASE KINASE 1-RELATED 1 462 - -
Lan16g0498 462 SMART serkin_6 83 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0498 462 Coils Coil 126 153 - -
Lan16g0498 462 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 462 - -
Lan16g0498 462 CDD STKc_phototropin_like 81 429 - -
Lan16g0498 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lan16g0498 462 SUPERFAMILY Protein kinase-like (PK-like) 61 435 IPR011009 -
Lan16g0498 462 Gene3D Phosphorylase Kinase; domain 1 81 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0498 Lan-Chr16 5157667 5159553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0498 7 462 AGC Kinase Gene Family AT2G34650 64.706 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan16g0498 Pkinase 2.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0498 - - gmx:100795536 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0340 4 5537353 5539251 Lan16g0498 16 5157667 5159553 LSH