Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0497 ATGACTTTTGAGCCATTAGATTGGTATTGTCAACCAGTTGCACGTGGAGTGTGGACAACAGTCGTGGAAAATGCCTTTGGCGCTTACACTCCTTGTGCAGTCGACTCTTTGGTTATCTCTGTTTCACAGTTAATACTTCTAGGTTCGTGCATCTACCGGATATGGTTGCTCAGGAAGGATTTTACGGTGAAGAGGTTCTGTTTGAGGTCCAAACTCTATAATTACATTCTGGGGTTGTTAGCTGCATATTGTGTGGCAGAGCCGTTATTCAGATTGTTCACGGGAATGTCAATTCTTAGTTTAGATGGGCAGACTCATCTTGCTCCATTTGAGATAGTTTCACTGATCATTGAAGCTCTTGCTTGGTGCTCTATGCTGATTTTGATTGGTATTGAAACTAAAGTCTACATCCATAAATTCCGATGGTTTGTCAGATTTGCTGCGATTTATAGTATTATAGGGAGTGCTGTTTTGTTCAATCTCATCATTTCTGTGAAGGAGTTCTATAGCAGATCTGTGCTGTATTTGTACATCAGTGAGGTGGTCTGCCAGGCTTTGTTTGCAATACTTTTGCTGGTCTACATTCCTACTTTGGATCCTTATCCCGGTTATACACCCATTCGGAGTGAATTGGTTACTGATGATACATATGATGAACTTCCTGGTGGAGAGACGATATGCCCTGAGAGGCGTGCCAACATATTGTCAAAAATTCTTTTTTCTTGGATGAATCCCATCATGAGACAAGGATATGAAAAACCACTTACAGAGAAAGACGTATGGAAATTAGATCCATGGGATAGAACTGAGACACTGAACAACAATTTCCAGAGATGCTGGGATGAAGAGTCTAAGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCAAGCCTTGGAGTAAGGTTTTGGTGTGGAGGCCTTTTCAAGATTGGCAATGATATTTCCCAATTTTTGGGCCCACTTATATTGAATCAGCTACTACAGTCTATGCAAAATGGTGATCCGGCATGGATTGGCTACATTTATGCCTTTTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGCGAAGGTCAATATTTTCAGAATGTCATGCGTGTTGGTTATCGGCTAAGATCAACACTGGTGGCTGCTGTTTTCCGCAAATCTCTAAGGCTTACTCATGAAGCCCGAAAGCAATTTGCATCAGGAAAAATAACCAACTTAATGACTACTGATGCTGAGGCACTCCAGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCTCCATTTCGTATTATCGTTGCATTGGTTCTTCTTTACCAACAACTAGGCGTTGCTTCACTCCTTGGTGCTTTGATGCTAGTTTTTTTGTTTCCACTACAGACATTTATCATCAGTAGAATGCAGAAGTTGTCTAGGGAAGGATTACAACGTACTGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTACAGAATGTCCGAAATGATGAGTTATCTTGGTTTCGGAAAGCATCGTTACTGGGTGCGTTAAATGGATTTATTCTAAACAGCATCCCTGTTGTTGTAACTGTGATTTCGTTTGGAGTCTTCACCTTGCTTGGAGGGGATTTGACACCAGCGAGAGCTTTCACTTCACTTTCTCTGTTTGCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTGGTCAATGCAAATGTATCTTTGAAGCGTCTGGAGGAGTTGCTCTTAGCAGAAGAGAGAATACTTCTACCAAATCCACCTCTTGAGCCTGGGTTACCGGCCATCTCGATAAAGAATGGATATTTTTCTTGGGATGCAAAGGCAGAGAGCGCCACATTGTCAAACATAAACTTGGATATACCTTCTGGTAGCTTAGTTGCAGTTGTTGGCAGTACTGGAGAAGGGAAGACGTCCCTCATATCTGCAATGCTTGGAGAACTTCCTCCAATTGCAGATTCAACTGTTGTTATGAGAGGGACAGTTGCTTATGTACCCCAAGTTTCGTGGATTTTTAATGCAACTGTGAGGAATAACATTTTATTTGGTTCTGCCTTTGACCCAATAAGATATGGAAGATCAATGGATGTGACTGAACTGAAGCACGACCTTGAGTTACTGCCTGGTGGTGATCTAACTGAAATTGGTGAAAGAGGAGTAAACATCAGTGGTGGCCAAAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATCTTTGATGACCCCCTAAGTGCTTTGGATGCGCATGTTGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAATCAGCTGCATTTCCTATCACAGGTTGATAGAATTATTTTGGTCCATGAAGGTATGGTGAAAGAGGAGGGAACATTTGAAGAGCTCTCTAGCCAGGGGCCATTTTTCCAAAAGCTTATGGAAAATGCGGGAAAGATGGAGGAGTACGAAGAAGAAAATGTAGATATTGAAACCACTGATCAGAAGTCATCTTCAAAACCAGTGGCCAATGGAGTATCTACTGATCATGCAAAGAGTGAAAGTAAACCAAAAGAAGGAAAATCTATACTTATTAAACAGGAAGAACGGGAAACAGGTGTTCTCAGTTTGAATGTTGTAAAAAGGTACAAGAATGCATTAGGAGGATTTTGGGTGGTTTTTGTACTCTTTGCATGCTATGTCTTGACAGAGGTGTTACGAGTGTGCAGTAGCACATGGTTAAGCTATTGGACTGATCAGAGTGCTTCTGTGAATTATAATCCTGGTTTCTTCAATCTGATATATGCAGCTCTAGCTTTTGGTCAGGTTATGGTGACTTTAACAAATTCTTATTGGTTAATCGTATCAAGTCTTCGTGCTGCCCAAAAGTTGCATGAAGCCATGCTTCACTCCATATTACGAGCTCCTATGGTTTTTTTTCATACAAATCCACTCGGAAGGATTATCAACAGGTTTGCAAAGGATCTAGGTGACATTGATCGCAGTGTTGCCCCATTTGTGAATATGTTTCTGGGTCAATTATTCCAGCTCTTTTCAACATTCATCCTGATAGGGATTGTCAGCACAATGTCCCTGTGGGCGATATTGCCATTGTTAGTACTGTTTTATGGAGCATATCTGTACTACCAGAGCACAGCCCGTGAAGTGAAGCGGCTAGATTCAATTAGCAGATCTCCCGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGTGCTTACAAAGCTTATGATCGAATGGCTTCTATTAATGGGAATTCTGTGGACAACAACATACGGTTCACTCTTGTGAACATGAGTGGAAATCGATGGCTTGGAATCCGCTTGGAAACTTTGGGAGGCATCATGATATGGTTTACTGCAACCTTTGCTGTGTTGCAGAATGGAAGGGCAAAGAACCAGCAGGAATTTGCATCAACTATGGGATTGCTACTTAGTTATGCTTTGAATATTACTAGTTTGCTGACTTCTGTGCTCAGGCTTGCAAGTATGGCAGAGAATAGTTTAAATGCAGTTGAGAGAATTGGCACCTATGTAGATTTGCCTTCGGAGGCTCCATCAATCATTGATGATAATCGACCTCCTTCTGGATGGCCCTCATCTGGGTCAATTAGATTTGAAGATGTCGTTCTTCGGTACAGGCCTGAACTTCCTCCTGTTCTGCATGGCTTGACTTTCACAATTTTTCCTAGTGATAAGGTTGGCATTGTTGGGAGGACAGGAGCAGGAAAATCTAGCATGCTTAATGTTTTATTTAGAATTGTGGAATTGGAAAGAGGAAGGATACTGATTGATGATTGCGATATATCAAAGTTTGGTTTGGCTGATTTACGTAAAGTTCTTGGAATTATACCACAATCCCCTGTTCTCTTTTCAGGAACTGTGAGATTTAACCTTGATCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACACTTGAAGGACGTGATACGTAGAAATTCTTTGGGGCTGGATACTGAGGTATCCGAGGCAGGGGAGAACTTCAGTGTTGGACAAAGGCAACTGTTGAGTCTTGCCAGGGCATTATTGCGGCGATCAAAGATATTAGTACTTGATGAGGCAACTGCAGCAGTTGATGTTAGGACAGATGCACTCATACAGAAAACAATCCGAGAGGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGTCTTAACACCATTATTGACAGTGATCGAATCATTTTGCTAGATGGCGGTAAGGTTCTTGAATATGATACCCCTGGCGAGCTGCTATCAAATGAAGGCAGTGCTTTCTCTAAGATGGTGCAGAGTACAGGAGCTGCAAATGCCCAATACTTACGCAGCTTGGCATTTGGCGGGGACAAGGTAGAAAGACGAGAAAACAAGCCTCTAGATGGCCATAGGAAATGGTTGTCTTCTTCTCGCTGGGCTGCTGCTGCCCAATTTGCTCTTGCTTCCAGTCTCACCTCATCACAGAATGACCTGCAACGGCTGGAAATAGAAGATGAGAACAGTATTCTCAAGAAGACAAAGGATGCTGTGATCACTTTGCAGCGGGTTTTGGAAAGGAAACATGATAAAGAAATCGAAGAATCTTTAGACCAGCACCAAATATCCTCAGATGGATGGTGGTCATCACTTTACAAGATGATTGAAGGTCTTGCTATAATGAGCAGATTGGCCAGCAATAGGCTCCCACAATCAGATTACAGTTTTGAGGATAAATCAATTGACTTTGATCAACCTGACATGTAA 4860 0.4181 MTFEPLDWYCQPVARGVWTTVVENAFGAYTPCAVDSLVISVSQLILLGSCIYRIWLLRKDFTVKRFCLRSKLYNYILGLLAAYCVAEPLFRLFTGMSILSLDGQTHLAPFEIVSLIIEALAWCSMLILIGIETKVYIHKFRWFVRFAAIYSIIGSAVLFNLIISVKEFYSRSVLYLYISEVVCQALFAILLLVYIPTLDPYPGYTPIRSELVTDDTYDELPGGETICPERRANILSKILFSWMNPIMRQGYEKPLTEKDVWKLDPWDRTETLNNNFQRCWDEESKKSKPWLLRALNASLGVRFWCGGLFKIGNDISQFLGPLILNQLLQSMQNGDPAWIGYIYAFSIFVGVVFGVLCEGQYFQNVMRVGYRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRIIVALVLLYQQLGVASLLGALMLVFLFPLQTFIISRMQKLSREGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKVQNVRNDELSWFRKASLLGALNGFILNSIPVVVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEELLLAEERILLPNPPLEPGLPAISIKNGYFSWDAKAESATLSNINLDIPSGSLVAVVGSTGEGKTSLISAMLGELPPIADSTVVMRGTVAYVPQVSWIFNATVRNNILFGSAFDPIRYGRSMDVTELKHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEELSSQGPFFQKLMENAGKMEEYEEENVDIETTDQKSSSKPVANGVSTDHAKSESKPKEGKSILIKQEERETGVLSLNVVKRYKNALGGFWVVFVLFACYVLTEVLRVCSSTWLSYWTDQSASVNYNPGFFNLIYAALAFGQVMVTLTNSYWLIVSSLRAAQKLHEAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRSVAPFVNMFLGQLFQLFSTFILIGIVSTMSLWAILPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMASINGNSVDNNIRFTLVNMSGNRWLGIRLETLGGIMIWFTATFAVLQNGRAKNQQEFASTMGLLLSYALNITSLLTSVLRLASMAENSLNAVERIGTYVDLPSEAPSIIDDNRPPSGWPSSGSIRFEDVVLRYRPELPPVLHGLTFTIFPSDKVGIVGRTGAGKSSMLNVLFRIVELERGRILIDDCDISKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDTEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDSDRIILLDGGKVLEYDTPGELLSNEGSAFSKMVQSTGAANAQYLRSLAFGGDKVERRENKPLDGHRKWLSSSRWAAAAQFALASSLTSSQNDLQRLEIEDENSILKKTKDAVITLQRVLERKHDKEIEESLDQHQISSDGWWSSLYKMIEGLAIMSRLASNRLPQSDYSFEDKSIDFDQPDM* 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0497 1619 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 35 1511 - -
Lan16g0497 1619 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Lan16g0497 1619 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 917 1200 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0497 1619 CDD ABC_6TM_ABCC_D1 305 587 IPR044746 GO:0140359
Lan16g0497 1619 CDD ABC_6TM_ABCC_D2 916 1212 IPR044726 GO:0140359
Lan16g0497 1619 CDD ABCC_MRP_domain1 615 815 - -
Lan16g0497 1619 Pfam ABC transporter transmembrane region 916 1161 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0497 1619 Pfam ABC transporter transmembrane region 304 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0497 1619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1468 IPR027417 -
Lan16g0497 1619 Gene3D - 610 864 IPR027417 -
Lan16g0497 1619 CDD ABCC_MRP_domain2 1235 1455 - -
Lan16g0497 1619 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Lan16g0497 1619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 838 IPR027417 -
Lan16g0497 1619 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Lan16g0497 1619 Pfam ABC transporter 1254 1402 IPR003439 GO:0005524
Lan16g0497 1619 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 35 1511 - -
Lan16g0497 1619 ProSitePatterns ABC transporters family signature. 1374 1388 IPR017871 GO:0005524
Lan16g0497 1619 Gene3D ABC transporter type 1, transmembrane domain 887 1218 IPR036640 GO:0005524|GO:0016021
Lan16g0497 1619 Gene3D ABC transporter type 1, transmembrane domain 274 601 IPR036640 GO:0005524|GO:0016021
Lan16g0497 1619 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1237 1471 IPR003439 GO:0005524
Lan16g0497 1619 SUPERFAMILY ABC transporter transmembrane region 289 595 IPR036640 GO:0005524|GO:0016021
Lan16g0497 1619 MobiDBLite consensus disorder prediction 849 886 - -
Lan16g0497 1619 SUPERFAMILY ABC transporter transmembrane region 913 1223 IPR036640 GO:0005524|GO:0016021
Lan16g0497 1619 Gene3D - 1220 1473 IPR027417 -
Lan16g0497 1619 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 583 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan16g0497 1619 SMART AAA_5 1263 1448 IPR003593 -
Lan16g0497 1619 SMART AAA_5 642 820 IPR003593 -
Lan16g0497 1619 MobiDBLite consensus disorder prediction 857 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0497 Lan-Chr16 5126675 5146973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0497 582 831 Calmodulin-binding Proteins AT2G36910 26.119 2.58e-21 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0497 - - gmx:100801762 2797.69