Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0477 ATGTCGCTTTCTTGTACCAAAAACTTCTTCCAGAGGTTCTGGATAGATGAATTCCAAATGGGAAGTTATGCTCATAGCAGCTTTTTGTCTAATGATCTCTTGCCATCTCTCGGAGCACGGATAAGCCAAGAAACTACGCTTCGAAGATACATAATCTCACCTTTCGGTCCCCGTTATAGGGCTTGGGAGATGTTACTGGTTGTTCTAGTCATATACTCAGCATGGATTTGCCCATTTGAGTTTGCTTTTCTGCCTTATAAGCCAGACACACTATTCATCATAGACAACATTGTCAATGGCTTTTTTGCCATTGATATCTTGCTCACATTTTTTGTAGCATATCTTGATAGCCATTCTTATCTTCTTGTTGATGATCCAAAGAAAATTGCAATAAGGTACTTGTCTACATGGTTTGTGTTTGATCTCTGCTCAACGGCACCGTTTCAGTTCTTTAGCTTCATCTTCACCAACCATAGCAGTAGTCTTGGATTCAAAGTCCTAAACATGCTTCGGTTGTGGCGTCTCAGACGAGTCAGTTCTCTATTTGCAAGACTAGAGAAGGATATTCGTTTCAATTACTTCTGGACTAGGTGTACAAAGCTCATTGCTGTAACACTATTTGCAGTACACTGTGCAGGATGTTTCAACTATCTAATAGCAGATAGGTACACTGACCCTAAAAGAACATGGATAGGTGCATTGTACCCAAATTTCAAAGAAGTGAGTCTTTGGGACAGATATGTGACTGCAATATACTGGTCCATTGTCACACTTACTACCACTGGCTATGGAGATTTACATGCCGAGAACACCAGAGAGATGGTGTTTGATATCGCTTACATGCTCTTCAACTTGGGATTAACATCATATATCATAGGAAACATGACTAACCTTGTAGTTCACTGGACCAGCCGCACCCGAAATTTTAGAGATACAATCAGAACAGCTTCTGAATTTGCTTCAAGAAATCAATTGCCCCATCAGATACAGAATCAAATGTTGTCTCACATATGTTTGAGGTTTAAAACAGAAGGATTGAAGCAGCAAGAAACATTGAACGATCTGCCGAAGACCATTCGTTCGAGCATTGCACACCATCTCTTTTTTCCTGTAGTGCAGAAGGTGTACCTCTTCCAAGGAGTCTCACATGACTTCCTTTTCCAACTGGTTTCAGAAATGGAAGCAGAGTATTTCCCACCAAAAGAAGATGTGATACTACAAAATGAGTCCTCTACAGACATGTATGTGCTGGTTTCAGGGACAGTGGATCTTATTCGATACATTGACGACCATGATCAGGTTCTTGGGAAGGCACTTGCAGTTGATAGTTTTGGAGAGGTTGGAGTTTTATATAATATACCACAGCCATTCACAGTTCGAACCACAGAGCTTTCTCAAATTTTAAGACTCAACAGAACATCCTTAATGAATGTTTTACAAGCAAAGCCAGGAGATGCACAAATTGTAATGCAGAACCTTATCATGAAGTTAAAGGGACATGAAGCATTGGGCTTTGAATGTCCAGATACAGATCCCGGATTGGTTCTTCATGAAGAGCTTGATGGAGGTAACACAAGAAGTTCTTCAAATGCATGTACAAATCATTCTCATGAACATTCACCAATGCAGGAAGAGAGGTACAAAAATCTCAGAAACTCCGAGGCCAACACGCTTAATGTGACTAGCGAAGATGGTTTCATCACTAAACATGACATGATTCCTCGGGATGGGAAAAGAGATCTTCATGCTGATTCACACACAGATAATCTTGAAATGGTTGAAATTCTGCTTGAAAGAGATGCAAACAAAAAGATGGCAAATGCTGTGGGGTGGACACAGGAGGCTGTGTTAGAAAAGTTAAAAAAGAAGAGCATTTCTGGCAAAATAATGAGTTGCGAAAATGAGAAGATATCAGATGAACATAGAATTGACTTCGTAGAGCCGGAAATCCTTAACCTTGACAGGAATGACTCAACCAGAAACAGAAAACCAGATGGTATTAGATCTATCAAGAAAACATATTCAAACTCCTATTCAAGAAATTCTAACTGTTCAAATGATAGAGAAGCAACAAGGTTCATCAAGAAGAGGGTAACAATTCACTTGCGATGCGGATGCATGGGTACCTCAAGCGGACAGCACGGAAAACTAATAATCCTACCTGATTCATTAGAAGAGTTGCTCAAAACTGCTGGGGGAAAATTTGGAGGCTTCAATCCCACAAAAGTATTTAATACAGAGAATGCAGAGATAGATGACATAAACGTCATTCGGGATGGTGATTATCTCTTTATTCTCTGCAGCAATTGTGAAAAATTGACTTCATGA 2328 0.3991 MSLSCTKNFFQRFWIDEFQMGSYAHSSFLSNDLLPSLGARISQETTLRRYIISPFGPRYRAWEMLLVVLVIYSAWICPFEFAFLPYKPDTLFIIDNIVNGFFAIDILLTFFVAYLDSHSYLLVDDPKKIAIRYLSTWFVFDLCSTAPFQFFSFIFTNHSSSLGFKVLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYTDPKRTWIGALYPNFKEVSLWDRYVTAIYWSIVTLTTTGYGDLHAENTREMVFDIAYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTIRTASEFASRNQLPHQIQNQMLSHICLRFKTEGLKQQETLNDLPKTIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLVSEMEAEYFPPKEDVILQNESSTDMYVLVSGTVDLIRYIDDHDQVLGKALAVDSFGEVGVLYNIPQPFTVRTTELSQILRLNRTSLMNVLQAKPGDAQIVMQNLIMKLKGHEALGFECPDTDPGLVLHEELDGGNTRSSSNACTNHSHEHSPMQEERYKNLRNSEANTLNVTSEDGFITKHDMIPRDGKRDLHADSHTDNLEMVEILLERDANKKMANAVGWTQEAVLEKLKKKSISGKIMSCENEKISDEHRIDFVEPEILNLDRNDSTRNRKPDGIRSIKKTYSNSYSRNSNCSNDREATRFIKKRVTIHLRCGCMGTSSGQHGKLIILPDSLEELLKTAGGKFGGFNPTKVFNTENAEIDDINVIRDGDYLFILCSNCEKLTS* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0477 775 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0477 775 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0477 775 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0477 775 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0477 775 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0477 775 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0477 775 SUPERFAMILY cAMP-binding domain-like 304 494 IPR018490 -
Lan16g0477 775 CDD CAP_ED 377 490 IPR000595 -
Lan16g0477 775 Gene3D Helix hairpin bin 301 365 - -
Lan16g0477 775 Gene3D - 60 300 - -
Lan16g0477 775 ProSiteProfiles KHA domain profile. 697 775 IPR021789 -
Lan16g0477 775 Pfam KHA, dimerisation domain of potassium ion channel 696 765 IPR021789 -
Lan16g0477 775 MobiDBLite consensus disorder prediction 522 537 - -
Lan16g0477 775 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan16g0477 775 ProSiteProfiles Ankyrin repeat profile. 576 608 IPR002110 GO:0005515
Lan16g0477 775 MobiDBLite consensus disorder prediction 522 542 - -
Lan16g0477 775 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Lan16g0477 775 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 775 - -
Lan16g0477 775 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Lan16g0477 775 PANTHER POTASSIUM CHANNEL AKT1 1 775 IPR045319 GO:0005249|GO:0006813
Lan16g0477 775 SMART cnmp_10 377 494 IPR000595 -
Lan16g0477 775 Gene3D Jelly Rolls 366 498 IPR014710 -
Lan16g0477 775 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0477 Lan-Chr16 4736237 4740694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0477 668 764 Ion Channels AT5G46240 45.714 1.42e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0477 K21867 - gmx:100783528 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0477 16 4736237 4740694 Lan16g0477 16 4736237 4740694 ECH