Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0474 ATGATCACTCTCACTCCCTTCTCATTCACTCAACTAACCCAATCCTTCATTTGCTTCATCCTATTCTTTATCCTATATGAACAAATCTTTTACTTTAAGAAGAAACGCTTCATCCCAGGCCCAACCCTTGTGTTTCCCTTCTTTGGCAATGCCATTTCATTGGTCCGTAACCCCACCAAGTTTTGGGCTCACCAAATTAAGTTAGCTAAGTCCACCAACCTAGGAATTTCTGCCAACTACATCTCCGGAAAGTTCGTTGTCTTCATAAGAGACACCGAACTCTCCCACAAAGTTTTCGCCAATGTTAGGCCCGATGGATTCTTATTTGTGGGCTTCCCCTTTGGAAAGAAACTCTTCGGTGAACGTAACATTATCTACATGATGGGCCAAGAACACAAGAATCTTCGTCGTAGGATCGCTCCCAACTTCACCCCAAACGCCCTTTCGACATATGTCACTTGGCAACAAATCATAATCCTCAAGCATCTCAAAACATGGGTCAAGCTATCAGAGCATCAATACCCTAACCCGATGCCACTCCGTAACTTGGCTCGTGACTTAAACTTAGACATGTCTGAAACCGTATTCTTGGGCCCTTACCTAGGCCCGAAAGCCCGCGAGAGCTTCGAGCATGATTATTTTTTGTTCAACGAAGCCTTCACTAGTTTCCCAATAGATCTTCCGGGAACTGCATTTCAAAAAGGAAGACTTTCAGTTTTTCGTCTTGAAAAAACCCTAGCCACATGCACAGAGTTGAGCAAAGTGAGAATGCAGAAAGGTGAAGAACCTTCATGCCTCATTGACTACTGGGTCCAAGACACACTCCGTGAAATCCAAGAAGCAAAGCTCGCCGGAGAAACATCACCGCCACCATTTTCCTCCGACGCCGAGATCGGTAGTTACTTGTTTGATTTTTTCTTTGCAGCTCAAGATGCAACCGTGTCATCGCTGCTATGGGCGGTGGCAATGCTAGACTTGCACCCGGAGGTGGTTGCAAAGGTGAGAGAAGAAGTCACCGGAGTCTGGTCGCCTGAGTCAGACACACTAATAACCGTCGAGCAACTCAGGGACATGAACTACACACAAGCGGTGGCGCGTGAGGTTGTAAGATACCGACCACCAACATTTTCTGTACCACACATTGCTGCAAAGGATTTCCCATTAACAGAATCTTATACAGTTCCAAAGGGAGCACTCGTTTTCCCATCGACACTCGAGTCATCGTTTCAAGGGTTCGTTGAACCGGACCGCTTCGACCCAGACCGGTTTTCGACGGAGAGACAAGAGGATCAAGTATATAAGAGGAATTTTCTGGCGTTTGGGGCTGGTTCACACCAATGTGTGGGTCAGAGATATGCTTTGAATCAATTGGTTTTGTTCATTGCAATGTTCACAGTGTTGATTGATTTCAAGAGGGAGAGAACAAGTGATTGTGATGAGTTGGCTTATGTACCTACTATTTGCCCTAAAGATGATTGCATGGTTGTTTTGTCTAAGCGTTGTGCACGATATCCCTCATTCTTTGAAGTAGAACAATTCACAAGATGA 1548 0.4535 MITLTPFSFTQLTQSFICFILFFILYEQIFYFKKKRFIPGPTLVFPFFGNAISLVRNPTKFWAHQIKLAKSTNLGISANYISGKFVVFIRDTELSHKVFANVRPDGFLFVGFPFGKKLFGERNIIYMMGQEHKNLRRRIAPNFTPNALSTYVTWQQIIILKHLKTWVKLSEHQYPNPMPLRNLARDLNLDMSETVFLGPYLGPKARESFEHDYFLFNEAFTSFPIDLPGTAFQKGRLSVFRLEKTLATCTELSKVRMQKGEEPSCLIDYWVQDTLREIQEAKLAGETSPPPFSSDAEIGSYLFDFFFAAQDATVSSLLWAVAMLDLHPEVVAKVREEVTGVWSPESDTLITVEQLRDMNYTQAVAREVVRYRPPTFSVPHIAAKDFPLTESYTVPKGALVFPSTLESSFQGFVEPDRFDPDRFSTERQEDQVYKRNFLAFGAGSHQCVGQRYALNQLVLFIAMFTVLIDFKRERTSDCDELAYVPTICPKDDCMVVLSKRCARYPSFFEVEQFTR* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0474 515 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lan16g0474 515 PANTHER CYTOCHROME P450 26 16 497 - -
Lan16g0474 515 Gene3D Cytochrome P450 31 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 PANTHER CYTOCHROME P450 61 16 497 - -
Lan16g0474 515 Pfam Cytochrome P450 39 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan16g0474 515 SUPERFAMILY Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0474 Lan-Chr16 4665152 4666741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0474 9 507 Cytochrome P450 AT2G34500 59.719 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0474 K09832 - gmx:100808148 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0353 4 5798722 5800783 Lan16g0474 16 4665152 4666741 LSH